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Human element [ hs136 ]


Position: chr13:71,793,422-71,795,334 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC00348 - DACH1

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTTATGCCTGCTAATCAAGTGCTTTAATAATTGGATATTCCTAGTCCTTTTATT
ATGAAATATAAAAGGGTAATAAAGAACAATTTAATATTTGGAGTATTTAA
TTCAAAATTATTAAGTGTTAATTGAAAATCCATTATTTTTAGCTACTAAT
GATTAAAGCAATTATAGGAGAGTTCAGTCTCCATTACAACATATTTTTGG
GGTGAAATATCCTAAAAAGGCATTCTCCTTTTTCAAGAAATTAAGCCTCC
TATATAAATTTGAAAACAAATAATCAGGCTTCAAGAATTGCTATCATTTT
GGATAGACTGGATTTATTTATTTTCCAGGAGATGTAACAATTAGATAGAT
CTATGAGGAATGGAGGATGAGGCCCCCGAGGTCACGGTGGACGTGTTTTC
TCAGTTTGCCCATGCTGTGCTAAAAAGCTGTTGTCTAAGGCAAAAGCAGC
GAAAGAAAATGCATTTAAAAGGCGGGGAGGGGGGTGCTTCTGTGAATTTA
TGAGAAGTGCATCACAAAGACAAATATTTCAGCCATGCAATTCCATTCGG
CCTTTTCAGCTGTGTGTCCATAGCAAGTCAACGGCTAAATTGAAAAATCA
ATTCCAATTTAAATTATTGGAATAAAGAACACCAGGAGTCAGAGATAAAA
TGGCTTTGTTCTCTGAGATCCTTTTTAATTGGAAAGTTATTTCTTCAGGG
TATTCTAATGGTTCTGAGGGAAGATTGCAAAATAAAGTTGATCGGCTGGG
GGAAGGTTAATAGCTAATGTGCTTTCCTTGCTGCACAGCAGTCTCCTGTC
TTTATGACATCCCCCATCATATCTGGAAGGACTGAAGATTCTAAATCATT
TGATACATGCAAGGACTGTATTTTTCCTTAGTCTTTCAGAAATCATCCTG
AGGCTGAAACCTTGGCTGAGCGTTGTTGCTCTTGCAGCCTTTCCAACTGG
ACTCACTTTTGCTTACAAATATCACATGACCCTtttctttctttctttct
ttcttttcttcttcttttTTAAAGAAAATTCTTAGGGGAATGTTCACCTA
CCGATTAAGCAGTAATTAATGAAAATGAAAGACACCTGAAGAGGATGCTA
GTAAGCGCTGTGCTCCTTAATGATGGAAAAGAAAGAAAGACAAATGCTGG
CTTGTACTAAACAGAGAAAAAAAGATACTAGTAGTTACAGACTTAGTAGA
AGGTGAACAAAGGTACAAAGGTAGCAGAGAGGAAAAACATGGTCTATATA
GAAAATATTAATAAATATTGTTATCAAAAGGTTAATACTACGATAAGAAA
CCAAGTCATGTTGAGACAGCTTCAACCCAAAGTTTAAAAAATGAAGCTTA
ATTAAACATATAATAACCTTTGGTCTGCCAGTAGAAAATTGTTTGGGGCA
GCTGTAGATTAGAAACCCTAAATGAGCATTTAATTTGAAATTAATAAAAC
AGCTATGGTATGTGTTAGAAAAAGTTACTGAGGTTTGTTTAGTATATTTA
ATACTGTAAAAGAGATAAATCTTGTTGCCATGTAATGAACTCAGAAGTGC
AGATACAGTAAATATGTACTTACGTTCTTGTTATTAATGCATTAAATTTG
TAGGAATATTCAAGAATTTAATTAGCATTTAATAAGATAGCTATAGCAAA
TTACAGTAGTTGGACattaaatgtaaattaatatttttagtatttaattg
atgttaactaattaattactatttattaCATGGTAGCTAGATTTATCTTT
TATGGAGTTATTAAATCTCAATTAAAATGCTCTTTTAAGAGGGCACATTC
AATTAAAAATAATATTCTGTAAGAATTTCAAAACTCCTTTCTCCCAGGAT
TTGGGGTATGTAAGTGCACAAATTAAATAAGCAGGACAGGACAGAAGGTA
AACAGAAA
Primer
(+)GTTATGCCTGCTAATCAAGTGCTTT
(+)TTTCTTGTTTACCTTCTGTCCTGTCC


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