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Mouse element [ mm1358 ]


Position: chr1:68,825,903-68,828,605 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Erbb4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCTTTGTTTCCACTTTCTTGCAtttcataagatgcaatgccaaatggtataatacaggt
caaagagaattcttaaatgtgataaaaaatgtaagagttcacttatttttagaaaaaaac
cctataaatttgcagagcagtaaaagctgtattatataccataacattattttatttttt
ttaaaggcattatctaacattatgccacagactgacctggaactcactacataaacctgg
ctagtcataaaatcatgacaatcttcctttcttagcctgccaagtgatagtattacatat
gtgagagatcataactggctacagattccatggagccaaaaactagacttttacattata
tgcagtaatgtgtttgtgggaaatacaattatttatacagatatttgttaaatatacaaa
aatatgaatgctaattttataagcattgtatttctgtaagctgatgacatgactgctcca
tggcatagttaagggaagggtttttgttgtatttgtgaaagagaacagccagatctgtta
agtgtccagagtagagcgagaaagaagtataatgaacatgaccagcagactgaacatgcc
caggcctatctgtgagagagggaagaatagcagacaagagagaatagagaaaacatggtg
agagaagcaagaacagagcagagtgatgaggaggggaaggagtatgggaagggagaggga
gggggtcagaaacagaaagagagaaagacagcaagagcataaaagagtagtagagttata
aggagcctgtgtagctgtggatagggaaatccattgagctagagggaatttagagcagta
gtagggtgaggacaggagggaggcggggaatgctagaagggctaaatactagcaaggact
ttggaatgtgtaccaagtacttgtgatactgaggaagcctggagaccatcaggagctttg
atatgctaataggcactccaggtagccatgtgtccctcctgacacatagaggttacctaa
atgactcctttttggtagagagagccagcttcattagttcctgaggaatgctggctttta
tctaagtaccaacaatctacctatagtccaggatgagttcatttattgatatatggacta
ccttgggaggtttctgtcagtggggtttcctttgaacctaacgttaatattaagtataat
gtgcaatacaaatgtggtactgccagtttgacacaatgtcaatgcaaactgcaggtggca
gatatatctttccagtgtgctccattttgaagctccacatttccacgggagagaaagtaa
caccgtgatttactttctgatttagtgaattatgcaatccattactttgaaattcaaaaa
caaccgttttatagcaccaagcacacagtagctctttgctagtttcacaggcgttctcaa
aaggtttctctttttatttctttctggtctgtgagggcaggaatgccaaacattccagtc
tatcagcaaaaaaaaaaaaaaaaaccaacctacaaactaggcaggaattcagctgagctc
attctgatggaatctcagagctagagaatctcttacccattagaaaagaaccaagatcaa
ttctccagcaaggttatgtctctttccccttttctgtcatatttaacagcagtgttttga
gacaaacaggcagctttaggtattgtgtaggtacccttcattctcaatgacttttttttc
ccttttcatttctccaccgatcccataactgtagttcgcaggtctttttctttttataca
atattaaaatccaaaagctcagtgccaccatcagaatgactgatgaaaaggatttcaagt
taaacccagtactgctttccattaagttaactggttcactgctgtgaagcccagaggcct
atgctgggattctatcacaccttcaaccgaactctcagactcagggataaaagatgatgt
tctgctttgaaaagttttcagcagccagtagatgaaccataaagtaatgaagggtttaag
ctgagcagtacatgctgatataatgtgaagaggcatacgaaaacagcccttcattcagca
cccagactgcttgctcctgggactctatcacagaagtcggtaagcaagccagacattatt
gcttttgtgcagctttcaaccctttatgtatgtatgccatgttttcaccatgacgcctat
ttaccttacacaccagatattattagataaaaaagcttaatatgtgatatatcccagggg
tgaagtcttgactcatgtctcatgttgagttgtcctgttcactacaattaaccactagcc
aagtgtgaattagcatatggttagactggagtactatgtgctgttaattctaaattgtat
acaggacttattccaatacacaaaccagatgcagcatgtaagagaatacatacacataat
tttcagtttttgtgtttcatatgcatcaactagcagcatatggcatattaattttgtcag
tttatctttttgtttcatggtgacaacttgaaaattttaaattacaggtacctttcatct
gggtatcaggagtgctaatatagagatctgcattaaacagacattagattaaatttaaat
atacaggttctttatcattgatacactgtaaagctagaaaaaGCAGAGAGTGAGATATGG
TGC
Primer
(+)TTCTTTGTTTCCACTTTCTTGCA
(+)GCACCATATCTCACTCTCTGC


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