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Mouse element [ mm1356 ]


Position: chr5:102,395,744-102,399,405 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Wdfy3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACCTGTCATCTCACCCAAAagattgtcttatgcgtataagatcttcgagggagcaaaga
aaacaaatatgtagttagcaccacgacttcccacagacagctcagcctgagaggatatca
acaatgaggacagagaagctagtgaaataagtctggggacatttcctaatctcaggtgtc
attccggacagaaaatgactggagctaacgtcactgagaaatttcccttcctgctacccg
ttcacagtcatacaaatcttacatcacaaatctctgctctgacaaaattaactagaacaa
gagtgtgtgctaagagaggagtcagttgccgggcagtggtggcgcatgcctgtaatccca
gcacttgggaggaagaggcaggtggatttctgagtttcgaggccagcctggtctacagag
tgagttccaggacagccagggctacacagagaaaccctgtctcgaaataacaaacagaga
gagagagagagagagagagagagagagagagagagagagagagagagagagagagagaga
gagagaggagtcagtcccactttgggtgcaggagggaatgaggtcagacgttttaaccat
ccctttcattagacgcttttcaggtgctaatgcaatcaaagctgcctcagtttcaaatct
attcattgaataacgtattgcatcccctcacacgaatggaattaatcctcaattaaagac
attctagttatccatgggctaagatgaacatctcagatcatgtatgtaactctaattgct
gaagccagtgctctggtctgcgctgccatgcccctgtgatgctacacacagatggagcat
ctgagaaagaagcaggctgggatctgggaaaggagcaggctgggatctggtcctgagggt
gagtccttcacaatgggatgagtacttacactaggaaagtcctgagcgctggctctctct
cagctgagctcagggagagaagggagccatctgtaaagcagaaaactacccagtacacag
aacaaagcagaaacctaatgcagagagtgcacagccttcctcctcccctcctgccggctt
tcaagctcccaaggcagatatgtcttctaagcaagtctgagtaattctctgggaaatttt
tcctccactaagagaaacatcaccaatgataggctcagcaagacaaccttactctgatct
catggtaccaggttaccagccacaaccaggactttttgtcaaaaggaggattgacccggt
ccttgctacaagattgtcccagatgacagtctccctgggctcctgcagaatgacctcgct
ggcctaacccctgatttagggttcctgtagctgatatgaaacacatgaccacaggcaact
tacagaggaaaacattcatttcctctttggctcctaggcaagggtccataaggcagggga
agtcggaggaactcaaggcaggggacgaaacaaaagccctggaggaatgtcctttactgg
cttgctcagcctgctttcctatagtatccaagaccatggggtccaggggtggcattgcct
tttacagagcggcctgccctccactcggtgaccagagccctcccacatcaatcattaatc
aagaaagcgccctgcaggccaatcgggtgagaactctgctctcaactgagcttccctctt
cccaagtgattgtagctttagtcaagctggaaaaaactaaacagaacagcccttaagtta
cttatggtgtaacaggaaacagacacacacacacagaggcacacacaccactcatgaagc
tgagaaacaaaagtgtactttggaagagtgaaaaatgtcttgattacagcagtcgagaac
attgcaccaaggaagtgtgacttaatccagactggtaagaggaactgaggtaagcactgt
ccttaggggaggagcttagtcgggacaggagtgtaaacacagtcagtcatctatgtggac
agagaaagagcatttagatcaaaatacaggaaggaagcaagaatgaagaggagaacctgg
gcgggcagactgcagactggccgggctccctcccacggaatttcagcagcacttttagag
agcggctgcccccatggcccacttaggtcagcttctataagtacctgtggatttgtttga
agctctcctccggatctccgtcaccatgagtcgggagacttgcgttgtgaactgcagaag
gtcagaaaatttctctgtcattgtatttggaggagcatttccaaaaacctgtggatgaga
gaacacatttcatgacgtaccggccttttgtttgtttgtgtgtttgtttgttttttaatt
atcaagttcaaaatgtgacataacttgaagatcaagttacatgagtgcagtgacatttcc
tctggacctgtttacacctaaagatcatggcttttgaaagatcacatctggccacatgtc
tttatacatacgaatgtaccaggcataaatcaggtggaaaagtctcactaacaaacctca
gaaaacaaccattctccaaggaaacctgaatgagacctttgagagacgtcactcgggggg
aggttcttcgatgggagaaagcaggggctgatggacccttactcctcattcaatatttta
caagtttctgagttctaaccacagtcgtccctaatataaggctgtcatgaaaatgacaag
gcaatggttaggaagcccgtaaacgagcttgctttcttggaaacttcggacaaatgaact
gtggaataaataattcttacagtaagctgctgtgggctcagcaaagagggatggaatgaa
agccagacagcccatcatagagagacactgcatgggaatactgtctgtgaggctgtcata
acagctcccacttataatatagtattcatattatcaatatcccaatgtcactataaagag
atcgggcgcagtccacacactttcccaagctaacaccacactatggttttgcaggagcgc
cccctaagtaaggctggttgtgactgttcctataagcgaacactacctggaggctgctaa
aggaacactggggctgactgggactatacaactatctatctatctatctatctatctatc
tatctatctatctatctatctatgagagacacaactatacccccagctcaggaagctggg
atggggagcccggaggccagagcagtctgtgtcacatagtaagacattgtctcaaaacca
aaagcaaaccaaaaataaaccagcaaataaagaggcagagcaacccagagggacccgcat
tgtgctcccgggtctggctcaattagtgaaaaggaaaagctagtcaatcatactcctccg
acgcagtctccctaaggcggacgcatgatacgggtataccgtacgcatgaggacgtctca
gtctggacttttccatacaataataaaagactttattccacagagcctagtaacagaggc
agaggacctcacaatatcattttaacaaaagatgtttcctacatccttacatagacactg
cttcaaattaggctaaacataacagaaacggtgcaaaggctactctgctcaaggagtaac
ctgtcccagcaactgcaccaaactgcatttacagaattccTCTATTCTTCCCTGATGCTT
GC
Primer
(+)CACCTGTCATCTCACCCAAA
(+)gcaagcaTCAGGGAAGAATAGA


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