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Mouse element [ mm1350 ]


Position: chr18:39,388,954-39,391,193 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Arhgap26(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTCTAATCCGCGCTTTTCAgtaaatggaagttctgtagtttgacttctttgtgtaagta
gttcacagtaaacacctttgctctcactgtgatggattttctgatttctcagtcttgaca
aacatttcctaagatggaaaaggtccttccccttcaggattttttatgctgtgtgtaaaa
atagatggaaagtgatttatcttctcctgtgattgatttttttaagagtcatgccacttt
ggatttttgaatgtaagagttggttaaatactacatctttaaaataatgtattttgcatc
tttaaaaatcttcatctgctgcctttggcaagagaggagggaaagtttctttcctgccag
cgacccggctaaggcgagggctggagtgtggggcacatccgtgaatccctgggcagcagt
gccaaatcccactcgtttgctaagagctgagttgagtgacagggaactttaattacagca
gcttttaggaggagagagaaaatgaagggaaaacagaagagcatttggcctggttggcct
gattgtgttctgatgctcatctaattaaaccatcctctttcctcttctcagggatcaatg
agcaggggctctaccgaatcgtgggggtcaactccagggtgcagaagttgctgagcgtcc
tgatgggtgagttccgcagtggctttgtcaggcatgtcccttgggtagcttcctctgtgc
cttcctggtttctaggtggtctctgggttagaaattaaggtatggggatgcccatgccca
gcaacctgccctgctagctagttgtggctataggcaggaacaggagaggctaggagtggg
cctttgtaacattgaaatgaaatggcgggaccaagcatctcacagtcttcaaactcagca
ctccagtccaagtgctgcttgcccactcaaatcacagccacgccctgctctgttgttagt
agctcatgacactgtcttcttctgaggcaggtattcagtaggacatacctcatgccccaa
aaagggcgtctttctagcctgtgaggacctcagggtctcacattcctgatccctagagta
tcatgtaacgttcagataaaatgtatatatgcagatcaaactcaagatccctcttgcttc
tggatttcaagccgtcacttgatcaggagagcctcctctgtctcccggctgatgtataaa
tagaaagccactgcctccaaatgtgcagtgtttgaatcaaaatccatgagccaaagttgc
ctaggctgcagatatcctgtatttttagccatgcagccagcttcagtgagtcacatggat
ctaaatggcaaacagatcaagtttcatagatcagtggctgttgtccatgtccacaaaagc
cgtagcctggtacttgggaagattaactctcagtccggctctaacgtggcgtttcaggcg
agggcctctctcctgtgtttgtcacttctttgtcactccagtttctgaaaatagcttttg
catgtgcagaagtctattcctttatatgggccagaatgtgctactcactctgcagttcgg
actcctcggtgtcgtgagttacactcagagccgctgttgggaggcatggtgcacgggagg
ctcagtctacactcacttcccgctcttcagttccaatgcgggatgcagttttattatttt
taaatttttgaaataattgtgagagacaaatgcattgtaccctttactccgattcctcca
attaatccttcttaacaggatgtgtttcaataccacaagaagatactggtattaatacag
cccaaatgagagagtttcaactctcataatggccttgggttcctttttatgtctactccc
tgccttacctcctcacacacaatccctaaccctggtgaccaggagtttattctttttttt
tcttttaattttgtcactttgaaatcatttgttatataaatggaataatacattgtgtaa
gatttgagtgttgagtatctttttttagtgcacttaattatttctagatttgattaactt
gtatgtatcattgctcattaatttctttttacctgctaagaagtattctattatatgggc
ataccacagtttagccattcacctgctacaggattttgggttatttccattttcaggcta
tagatatttagagagaatttttatatgagcatatttttattctcatagaataagtaccca
AGGGTTCTATTGTTGGGCCA
Primer
(+)GCTCTAATCCGCGCTTTTCA
(+)tggcccaacaatagaaccct


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