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Mouse element [ mm1349 ]


Position: chr11:77,738,264-77,741,018 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm11190(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGCCTTTCTGCAAACTGTGAatcagctacgagaccatgccttctgcagttgcaaagcttt
atcccagggcttactcagaaggggagacatgattactctctcacattttttcaatccagc
ccccccagtcttgcctcaggcacaagaagaacaaacactcttttgccttcaccctggccc
aggctgggcagctatcagagacagtggcatgaggtcaggtgtcagatcaccctggctggg
atgttgttcacaccaaccctttcctgcctggtgtcagcagaagcgattggcactggccct
atcatttctgtattcaggggcataccagctgtgctcccttccccagagaaagaactcaaa
tgtgtagcaaggaggatgctttgagacagggtcacatacaacccaaactgaccccaagct
atagttgagggtgaccttgaacttctaatcctcccgcctccaccatctgagggctgactg
ggattagaggcatgcatcatcatgctcagtgtgtagagtgctgggcattgaacccaggga
ttcatgcatgctgggcaggcactctaccaactgagccacatccctatctcagaactcaga
tgtttgagagggtatttcagccaactgccaagcctgactctcctgtcaccatttctaggt
caccatggaatccctggttgcctattgacgaagggtatctaaatggtgaccctgaggcct
ctgcatctttccacggagcttagcctaccaggtgacccatttccttaggacatgatcatc
aacctggtcctgagtccccagcccctgagcagcaccgtaaacccaatgcctctggcagac
acgttttatgtcagttcaagcactaggactactgagttcagaggattttatttctagagc
cttccatatttctccaggattatcacctgtctttgctcccccccccctctctctctcctg
gtttattatttttggaccctttccaagccaagctgccttgatcgcttggggagacaaagg
cccccagcatcctcccacggtgtctttgggtctggcaagggtgcccttggggaccatttc
ttttcctttggcataaactcttcgactggccacaatatccaggtggccttggcttttagg
agctagtttgcctaaaagactttctgtgtgtgtcagggactatggaggcggggagtgaag
gcctctgtctccaaggttggggagggctatgagaagagtaagccctggggtacagagggg
agggagaaggccagctgttctctttcttacaccgtgccaacctagcctgacaccaaatta
atagcattcaaatgagatgcaaagcattatgcaaatattgaagagaaggccactcttacc
agagcctctgggctgttggaaggccagtgcctggagccctttcatggaggaccccatggg
ctcgcttccacttcaatcctcatacttcagtaccagcttgtgcgtaggaccaaagacact
ggccaggcactcaaattggctttgcctcccaagcactcaggcagggccccttcccatcta
aaacaagccacaggcagctgtgaaggtagcataacctccctgggtctcctttccccactc
atcagcacgtatgcaaactagatgcaaggtttttgcatctatttaactgtccattaaaat
agccccatgcccatcacctctgcacaggcccctgcttccaaattgccaacccctgctgcc
tgcaaaagccatgtgtttcctgagcctggtaattgctgtggtgtttgttgagctgtattt
gcatttgattgtcatttaactttctatctttctccttcaatcaaaccgggtagggggata
ggggtggggtggaaaggtggggagctggcggcgagggtgtggggagagagttgggcttct
acaactgattcttcatttttgtctcagccctatcatggttttcaaagagcttcattaatt
agtaccacaaacttgaacccggagacttctgcctccacgtggcgggggaggggctcctcc
cacccgtcccagggctcctaagtgcaaatgattttgccaacgggatggatctcaagtcct
atctccagtctgcgtgtttcagcacctgcctcatttctgcccagccagtggcattaaaca
tttatggagctgtagaggatcaaaggcctccgctggaggtggtgggcaggctggaggccc
gggtttggaggatggaaagtagttcacatcaaaccgctttctgctgctgtctcagtgcac
cctaggctcttgccacagatctggtcccattcctggagtgggagctaatgctcagagcca
gaaccctcaggtgactgactttgggtagccaaggatatcaggcctgatattcatggccat
accagaagccactgagtctggagacttgctcaaagatgatggtggctgtgcccctaccat
ctctgggatgaagtgacagccctttcctctgctcccctaaaacccaaaacccctttggat
gctctgatttgaaaactgtcttgcagaagagtagatctgggctttcttggtttggggttt
tcttttccctcctcttcttgctcagaaagcaagtgtcatcccagctgacttcaaaataag
tcaccgataggcctgtgatcccatgagttgatgagttgtttagaattgggaaagtggggg
gttggagagatggctcagcagttaagagcactgacTGCTCTTCTGAAGGTCCTGA
Primer
(+)GGCCTTTCTGCAAACTGTGA
(+)tcaggaccttcagaagagca


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