Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1332 ]


Position: chr4:134,812,881-134,816,704 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Clic4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAAAGGCAGAAGTGAGCAGGgtgcactgtgttcactctaagtgctctctttagtgatact
tttaacattaccaggcccaagagtcaggtgctattacctaaatggggacaccaagtgaag
cggggagccaggatttaaacacagctgcatagctccggcatccaatttttaaaactaaaa
tgtgggtagggtgggtacatgagccacagcatgcatgtaggggtcagaggacaccctcga
gtgtcagtccacagtggccactgtatttagacaaggtctcttatttaccatccatgtcag
actagctggcctgcaggcttctagggagtctgtgtgccagcagcactgagattataggcg
cacaccactgtgcctggctcgacacgggtcgtagggacccaaactcaggtcctcacacat
gcatggcaagcacctagcccactgagacatctccccagctctccagtgtccactcttatc
tagtacactctgacagatggcaaaacactaaactcaactgtatacttaattccaactacc
tgcaccttcgaaatggaggaatactctggtgccaacctagaaagcacaggtgataccgta
agcagccatcaccctctggctctaacttagggatctcagatctcaaataaatcttagcac
ttagaggctgaggcaggaagacttcaggttcaaaggcatgactacactgggaaagtctgt
ctcaaaaaaaaaaaaagaaaagaaaagaaaaaaaaaagaaagagagagagagggagggag
ggagggagggagggaaggagggagggagggtaaggctttcatttgagtatatcatttttt
taattagatattttctttatttacatttcaaatgttatcccctttcctggtttcccctcc
gaaaaccccctcccccttcccccttcccccttccccaacccacccacacccacttcctgg
ccctggcattccccctatactgggacatagaaccttcacaggagcaagggcctctcctcc
cactgatgaccgactaggccatcctctgctacatatgcagctggagccctgagtcccacc
atgtgttttctttggttggtggtttagtcctggggagctctgggggtgctggttagtaag
aacctctctgagatacactaaagcaaaacagctatgagccatggcactcgtgttcccagc
ttgctcttttcacttgttctctagggatttgtgtgtttggtttatagtactggagctcga
acccggagcctcacgggtgtgctaggcaaacactctacagatgtgcttcacccttcaacc
tatttatccggcttctcatatgagcactcttgtgaatttaacaagcgcttgcattttccc
agtcacgtgggttgttttttttattgtttctttcttttcccgatagctgcctctggaata
aagtgtgtggaaaggggggtggggtgggggagcccagttcttcagcagcatttcattgac
taacaatccaatgagttaatccacactgcagttacacacagctctgcacaaacatctgta
ccagctcgaataagtatgaacactcttctccgcattccttctgccctgcatttgggaaac
gcaacacaaaaataagtctcagagaccagacatctactctaaacacactcatggcaagct
tctgcaagtggagaaagcctccaggcccagggattacaatggctccccaggaaagctttc
agggactctgcagaacgttccttcctacactagcactcctccagcccggagctccagagt
gcatctggctttgtttcctctcggcctggagcagctgctggcatccaaccggcactaagg
aaaggctagtttaatgaaaattgcttaaagtggcacaaatttgtacctctctgtattctt
gaaaaaaaaaaaggacacaaaatataatgtgctctatcactgagccctaagtttgtttaa
gacatcattttaaatgagacaaagtgacaggatctggcaatgacagaggcacagcaccac
aaccttcttagaacactatatttaaagcgacagctgccagaaaaataaggaattaaaaaa
tggtacaaattctataaaatgatagaagatataagcagcatagggagaaaaatatcaagt
taaatcctgaaagctcggtcctcatttactactctcggttctagcattagagaaagattc
ctcctgtagtttaccatgagaagtttatcttccaaggcctaaccagcatgcagaagagga
ccctacatcatatgcacaaaatttaaaaaaccatacacacaaagcgtcacctagagccag
ccagcagaggtggcacctgtctgtcatcccggcaaccagaggcagggacagtttgccaag
catctgagacatcctggactacatgagctcaaggttagctttggctacagaccctgtctc
aaagtttactccctagttagagaagagggtgggacacacacaccctataaggcacctgaa
acgagaaagttgaaaattccttaaaataaaaggttttgtgtttgtttgtttgtttgtttg
tgtcttattttacttcgattggctggttttactccagggatttggtgggaggcaggcccc
agtctcaatacttagttctggcgtgcctgacgctcacagagatccacctgccacattcaa
gcaatctatttttatttcatgtgtttgttttgcctgtgtatgtgtgtgtgtattacatgc
atgcccagtgccctgaggccaggaggacaccagattctctggaattaagaatggagttac
agagacaaagtttggagctgagacgaaaggatggaccatctagagactgccatatccagg
gatccaccccataatcagcttccaaacgctgacaccattgcatacactagcaagatttta
tcgaaaggacccagatgtagctgtctcttgtgagactaggccggggcctagcaaacacag
aagtggatgctcacagtcagctattggatggatcacagggcccccaatggaggagctaga
gaaagtacccaaggagctaaagggatctgcaaccatataggtggaacaacattttgaact
aaccagtaccccggagctcttgactctagctgcatatgtatcaaaagatggcctagtcgg
ccatcactggaaagagaggcccattggacacgcaaactgtatatgccccagtacagggga
acaccagggccaaaaaaatggaaatgagtgggtagggaagtgggggggagggtatggggg
acttttgggatagcattggaaatgtaattgaggaaaatatgtaataaaaaatattaattt
aaaaaaaaaaaaagaatggcaggcagttacaggaaccaaacaaggtcctctgcaagagca
gcacaagccatctttccagggtccaaatgaaaattcttcatttattgctttggcctttga
agataactaaaactcagcagactgtaagcaccatgccatcctaaaagctagagtcaagtg
actatctgtgtaggctgagatctctttcagctaaggactgtcacacaagagtaagtgcaa
ggcttcagagaaatacagctggcagctgatcaggcaaaatctcaccactaaaccaacagt
gttttaatgacacaccagcgacatcagccagcctgtgctttactgtctgtcaactattca
tccaatacaactgtcaaacagacgctatttttccaaaggactgcgtatttacagggtact
tagagtgaaatcagcagcagtagaGTTAGGGCCTACCAACTGCA
Primer
(+)CAAAGGCAGAAGTGAGCAGG
(+)TGCAGTTGGTAGGCCCTAAC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.