Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1331 ]


Position: chr18:61,508,461-61,511,783 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ppargc1b(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCCTTGCAGCTACATTCCTagtctgttccagaggctaggaatataacgcagttaaaaga
gtgcttgcctagcttgcttgaagccttgagttccgtaacaaaacagatgcacttcaaaca
ctgatgcgggggtgcacattggtaatctagagcttgggaggtagaagaggcaagatcagg
agttaaagatcaccctcagctacacagagttcaagggctgttcaagcccaagcctgggct
tacatgagaccttgtcattcatagatagatataaatagaagccccatttcttaaacaaag
tcaagaatctggttctctctttaccatcttgcctgagtcaggcctcaaaatggaatagac
tggatctgggaaaagatccttgctcttagttggccccctttgtctccggggagatgtttg
caaaagcgggtagagagtccaacatctcctcttctactctgctcccaaaggaccacagct
ctcccgtgagagcccctgaggactcccaatccgaagtctatttgctgttcccattttaca
gcatccccacccttgactccaaatagcagcaggctccattttcccctcccaccccatcct
gccaggtgattgctgtctgcacttcctccaccacctttctctatgacttacctaaaggcc
gccggtgccctctcggtgccctctccaagggctttggcactgtttctctacaaggaagct
ttagattcaaggcagggatttacaatatgcgccctggactgaggaagggttcgttcatcc
tgcatttatttcgatagcaaagccttcataggcctgccctttcacacacaaacagcaaaa
aattgcagcactgggatatggccctcaatatcttaatctataaaacattacaagaaggaa
ggagggtactgctggctgttgtctcctttgctcttgggactaggctggccttgaaattgt
ggtcctccccctctgcctcctgagtgctgggattactatagggtggaggggatcaccaca
cctggtcttatttgtatgcgtgtgtgtttgtgtgtgtgtgtgtgtgaatgcatgctcaca
catgtatgtattatgtatgtatatgtgtatgtgtatttggtagtactagggattgaactc
agaacctcagcctgctaagcaagcacactaccactgagctatgcccctagccctgtttgt
atttttccatttagagaaaaggactccccaagctgtacttgaacttgctccatgggccag
gcaggctttgaacttgctatttttctgcctcacacttctaagtagcagggcttccttaca
ggcttgctcttcgaggtttggctctgtcagtatccctccaagtttggtccctagccactc
cttggagaatcttcctggagagcagagactcagaaccacggatcccagggaccccagtga
tgctgaagccatctcagggaaatccaagacctttatccaagacctcaagcagaaaagtaa
ctattactgtaaatgtgtgactacgcacacatatccaccacaactgctagcccatgatac
acagccaggcttcctgtgacctccaacagaaggaaggcactcagcacgaaccacaggaga
gagatccacggtgtgctatcatctgccttcacttaatcacaagcactttccatgttcctc
acaccacagtcagaagcggggcctctctgagtgagatgtgccccttgacattataatctt
ctaaactggagaggcctccaggaaacaagggcaggctgtagaccagctcattctggatta
gactggtttggggctgtagaaataagagaggatccaggtaccagctgctgaccgcagagc
agtctggccaggcagagcaggtaaagggagctggcacaaggaagaagcaccccaaggggt
cgacccacaccccaaggggttagctttcccatggactaagatggtagcttcctcccactc
ccagcaaaggagaaatctgctcacagctgactgggacatgctataaatggtgctgcagca
agatcctggtccctggatagtacatatgattgtcatctgagctcaaacaggaaacaaatg
cttagagacattaagtaacatgcacaaggtcacccagctaggaaggcgtagagccagtag
gtgaacccaggtagtgtgcccggtgacaacacagatcctttactttgtatatcacctccc
ctcctttcttacccaggcagcctgggaacagtgtcgttcagccctgcagagtaggcacag
ataaaagagcagacccatttttaatttcacggttgtcaatgaatgactaaaggcataagg
gcattttctgaacaacaacaaaaaaagggcatagcccttccggaagcatggccataggtt
ctggagtgagatgcaccatgaagaggctgggggcatcaactccacagctaggctccctag
gcccaaaccttgctctacaactctgggatctgggccatgtgacttggcatttatgcccaa
gtgccattttctataaaccaaaagacaacaatagtaaatacttcatagggttattttgag
gattaaatgaggatataaacaaaaacacttaggagaacagtggctagcacataaaactgc
ttgctgctattttgagtgtgacaaaatgacttcacatttatgagtttatttcaacctcct
taaccaccctgcttagttcacatttagttcacataaaggaagggtctgttccagtctgca
gatgaggaaaaggaacttagcaaggagcatgtcttccataaggacacacccagtttctac
aactcagagttctcaagtcacttcccaggcctgcctctctctcacaggtctctctctctc
tctctctctctctctctccctctctctctcttgagccctgaggcgattcttaattttgtt
ttgttgattcatgtctgaagtgaaagatctggaaacatgtacatgaatggcttcaacaca
gtgagcataccaccattttttgtgtctttgcccattgcagacacaatcaacagcaggtct
ctttccggccaagtcagagcaccgctttgaattttccaatgactgttatcagttaagcac
aaatggacaaatccaacctttccactccataggaagagacttcccccccccaccccccgc
cccaaactcaggatatttctttatctagctataacatggaaatgatacataatctagcta
taacatggaaatgatacatatagccctatccatgttcttaaatatattaacctttcctat
agaTACCATGATCACAGTGCCCC
Primer
(+)TCCCTTGCAGCTACATTCCT
(+)GGGGCACTGTGATCATGGTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.