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Human element [ hs1327 ]


Position: chr5:2,204,457-2,208,380 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR548BA - LOC100506858

Timepoints:
e11.5

Forebrain staining is restricted to forebrain/midbrain boundary region.

Expression Pattern
forebrain (5 out of 6 embryos) 
hindbrain (rhombencephalon) (5 out of 6 embryos) 
midbrain (mesencephalon) (5 out of 6 embryos) 
neural tube (5 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
TACCTTTCCTGGCTGCAAATcaggacttgaggagactgacagacacatacagcatctgat
gagatcaaggcaaccaaacgcgaggcaatagaaggcagggcaggtgggcacagtgggaat
cctgagcgaggcatggccccttacaaggcacccagggcacatggtcctcgggaagtggcc
actcactcggagcagccctgcgtggctggtggacagtggcctccgcaagaacgtggctga
tggacagtgacctcaggaatgtcttcccctccctgtaggaggccctccttgtcttcccat
ccctacaggaggcactcccaacaccttcactcagaacataccctgggctgccaccgagag
ccaggagctgcaaatgcaagagtcaagaagcagaaaggacaggctcagccctcctggagc
ttcctgtccaggacggaaacaggtcacgagtgtgccagggagtggacactcccgtgtgac
tgccacgtgcccaaagaggacaggaagcagcgagaggaaccacggactcacggagaacca
taggagagggaggctggtgggggttatctggggaagtatgtcccagggactggcaaccct
gtgggcctgggtagaaggagggagggaggctgtagactgtgatgccagggaagtgggggt
ggggctggggcttgggcgggaccccggtttctgaccctaagccatccaaggaccctggag
gtcttgggccccaaggaaggagccctgacttactgggaagggttgagaatgggctgtacg
ggccaggcccggatggagcagggaggccgggggagtagggtgcctcatgcaagtgtggga
ggcgctgcccatcacggggccttggccatggggatgatgagaaatggctgggttgggttt
cctttgacgttttgagtagaagatgctgagcttaaatcatgaaccctggagcactgctct
ggttctggggcatggagaggaggtaagatgtcacgccagggcatggaggggaggtgagac
gccgcgcccgggcacggaggggaggtgagacgccgtgccggggcatcaatgggaggtaac
gcatgtgcagaggccacgctgggcttcaccagcagctggtcagaagaggctgcccttctt
tggggcttgttagcacccctgaaagaaagaaaaatgagataacaataaaaagagcaatgc
aaaccaagttagaaatcaacatgcctcccaaaactgtgccccttttcaccaaatggaaac
gtgagaccagcagaggagcccctggtgctggccccgtcgtctctgccgagccgagcacca
gagtcggctgcgtgtccacagccatgactgttctccaacgagaggagaacggaggccttg
gaggaatcctcagagtcatcctgaggaacctcagaagttgggaaattctgccactgccgt
ccggttttgcccctgtacacactgcggccccattaatccgtgtggcgtccccagatcagc
cacagccaccacaagtacgtggcgacttggccgcgggcacattcatgcagatgaaatggg
aatttaacaacgtctcagggcgaatgcctgttgtccttttttttaagtgtgtcacatgat
cgcgctgtgtgacatcgcaaatctccatctcggctttgttggcctctatgcatgaataat
tttcccagtgcttgtttttagtgcagccagaaaaagagcgcattaccggcgcgcaatctc
ttgttgtccgcgatcagcattctgtgggtctgagctggcttacaacggtgtaaagacccc
agcggcatgtgttataatatatgagccattgtccccctgaagaacgcacgaaagaaagag
cattgttctaccagggagcaattcagcgggtttttcccagagactcttgggtcaagtttt
tataggcctatttgattttcaaattcttccttacgctctttcctctccgcgcgcatagtg
tccaaacttgtctacattcacttcccatgttccgtgcatggtagatggcctttaaaaaga
gtatctcaaataagtctttattcgtgttttgttgggtctcactctgtgttttcatgaact
ccggccccagccatggcaactgcaagaaaatgttaacaatgattgacaggattagaaaag
cctccgtccctatccgcatttcaaacactttgggaacaatggtgtttggtgtgattgaat
taatgagataccatgggctgtcaaaagagcacacagactttacataaacctgattatctt
tgcatggcagaaacggaaaaaaaaatataggggagagtgcagtttggctttcacgcctac
ctccaaaggagcttggaaggccgggcctgctccgtcagaggggccgctcagctggccggg
cctccctccgtcggcatacatcagccatggtatttaacaagtctattcaggaaaccaggc
cccaaacagccttctttcacaactcggcacctctgtgggttttttttttttttttttttt
tttttaaattttccctgggagccattgttcaagaacacatttcaacaattagacctgagc
ctgcggcccctgccccgtcctcaccctgccaagaggcggaggcctgggtcccgaccatca
cagtgtttaaaggtcgggcctagccggtgcagacgttaagtcatggaggacaccagcaag
aaccctgtttatggatgggcgtccgctctgatgatcaggagttctgcgtggtgcctgaag
tccttggctgaagctgcgtgttgtattggggaaatgaggatgagcctctaaatatgattc
agtttcttacagagagcagagcgaccatctcccttctgggacaccttccactgagagagc
acctgaaccgggcttgcaaagttccctgtgaaaagcccccagagctgagagcaggtacat
aatcccatctcatcatttacagatatggcttaggcacccagagagcaccagcgactcagc
tggtggagacccacaaggcttgggaagagcggtggctcctgggtctgcacctcaccgcct
gtgctggcaccatcttaagagtaaagctcactcaaagtcacaaagaagcaagtgagcaaa
gggatacgggagactgtcttccagccccagcacagtccctgagcacctttgcttctgcag
ctgccattgtggctcacaatcacggagcgacgtctgagagcagccacaccagttgagatc
acggaactatgtctgagagcagccatgccagttgagaaggccacgctgctccactctagt
aaacaccacgcaaagtagagtgaggaaggaccagggaagagagcggcatctgcaaaacta
gggcggatctcagctgtgcccaccacatgctgctggtcacctttcctgcagaggcaagaa
cccaagccggctttccagtcacagaacagttccacagacacttcgctggccagcgcctct
actttatcctcagtccaccgattaaatgtgacaggtgcacacacacaggggaggaggtgt
aacttgggtctttggacatggcccttctttccagagtgaacttggggctgctagagcctg
ggtccctgtggatgggcggctggaggcccggaggccccagcacagctctggagaagtgca
tgctccaggattgacatctgcacctgtgtgtgaagctcctctccccactccctttcagag
cctaagaacagcctggggactctgaattcatccttggcatgacacccgacagcaaggcct
gctcccggcccagccagcagatgtccctgtttcacacagggtcctggatccggccaccgt
cctccccggccggcagcatcccaggtctgctaacccgccggacggggcaagcgggaaggc
cgctTCAGCTCTTTCTCACGCAGA
Primer
(+)tacctttcctggctgcaaat
(+)tctgcgtgagaaagagctga


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