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Human element [ hs1323 ]


Position: chr9:87,604,796-87,606,909 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NTRK2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTTTCAAACCCAGGCAGTCtagtaccttgtacctaaagaacatacaattttagcacata
aagttcctaggtgtaaagtgagttggtaataacaagtacaatatcccaacattggtggca
tcttttgctgggggttttttgcctttcactccttgctcaggcagcacagacgttatctat
gcactgccaggctggtcctgaggattaaattagatgaaatgctttggaaactggaaggag
cctagaaatgtaggagcttgctattatctccaatagtctctcaaaggccaggcggatatt
catctttgtatcccaggcatctagcagagtttgttcaataaatatttgttgaaatgaaat
gaatgaaagatttgtcaaatgtcatgttgagagccagcgcttgggagtcaagcatgtcac
agagtctttgtgtcaaaaatgacatcagaggaaaaaaggtgaatgtgacattgttgtgta
tcttacttaatacggacaaataaggcttttctctgcactgattgctccatctgaaaacca
attgcctcccattttgtgtggttttgtattcattctcgaagcccaggcactcttttgctc
taagggtttcctgacttggatgttaagcgagcttctagccctggcttgtttctgtgttgt
caggcacagataaaggcatggtggaatttgcccattcctttgagtgaaggaaactgtcag
aaacattgtggtcagcctttagaaactctcccacgttggttccaaagagaacatttgtgt
gtgtgtttgctttggttttgagaactaaacacccctttgacattacgtgcgccagctcct
gaacactggggtgtttcagaaatgatgccatgggcacatgacgcaagaagcactgccctg
ctttagcaacaggaagaaaagagacctgaaggagaggcttaaagaacagaggggaatgaa
tggaagtgtttcagagaggacaatgctgaggggcaccccacaattagagaggatcacccc
cacccctcactgtcaattgcatttttgtccttttaaaattattgaagaggatataaaggc
tccgaatgctgttggcccggcatctttccctgtagcaacatcaaaagtcttgggtcacac
tgggtaggagcaggctgcctccaagcaacttggccagcaagcatacctggatggattcgt
cccttccctgaagcgatttattaggaaagctcacaccttatattgacacatttcctctct
ttttcaaaggagggataattgtgtttcaaatatgattttctagcagagcaaaaacagtaa
tttgtttttgccctcagtggcaagattcacattttgatcagagcacattcaatctctaat
acattttactgagtacataggtagcatcttgttaacgagacaaggacatagcggacacgt
tgcttccctccgtatttctgtgctgggcaccccgtggatgtggcgatatgaacattagtt
atgcagatgaagtctctcagtgccaggccctgaatcctctcagccaggtattatctatgc
gagtttatctgtccagtggcacattagcagggtgcatcccctggtcggttctcaaccgtg
gaagctctccatctccaaccacatcatcccccaaaccatttttctccctctcccttccct
ttgagcccttcttctttggaaattcaccagtggaatttttctccccacatctctatggtg
agttttcccagctttggaaggctcagttgccatggtagcgagcctcctccgcctggagct
gagctggtgatttcggaagaagggattgtggtggtaggagggaggggaagaaaagtcatt
aaagtcggccaattagtatgcagggccagtgcccccttgcagttcctctcacacgaggaa
cagccagggctctttagatccctgctggtcgagatgcaatgaagcaaagggaggggagac
ctcccagccgtgcacctgtctgaaggtacctgtctggaggaggccttccatggcctcagt
ccagggaggagccaagtcctgctgccaccccacaaccagtgcctcctcctcctcTGACCT
CCTGTCTTTTGCCT
Primer
(+)tttttcaaacccaggcagtc
(+)aggcaaaagacaggaggtca


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