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Mouse element [ mm1319 ]


Position: chr18:5,185,220-5,188,223 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Svil - Zfp438

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGAGCCCTTGTCCTTCTCAaggatgcactactgtggcatctgtgtaccacacacactcc
ttatcaacccacatccccaagctctccttgctcctcttcacctgctccattcagttttga
tttgcactctgcctccaactagagtcctggctgtggtcagacatcagtgaactaaccatg
agccatgagcttccctgacgctgacctaatttccatggcctgtttttcaaccttttctat
cgtcctctttcttctttataagagtaaattgatggtttgagatcaagcagtttgtgctgc
caaaaatccagggaggctgcagaaggtcagagcactgtagagaaaaagcttccctggggc
caggatcatccagagcctcccactcactctgtgttgtgcccttgttggacagaaggctgc
tatgctgtgccatgtactatcgctggggcaggaggaccgtcactgtctggttctagtgcc
agagcttagttgttgagacacatgtcactctgatgtaaatccagactaggtcttgggcag
gtgttcactcctacaatgagcccccatgttttctgtgaacatcccactctgcacaacaga
aatgggataaatgccatttggaccttggctatggtctataagagtggaagagttcagcag
aaacaaagagtttgctaaccctgggtctagataattcccgggttagtgaaaacattatag
tgggtctttacttaacaaaagggatagatagggctattggattcttatgctgctggaact
ggaatttggggccttccatttcatgttccctatactaaactcaatcccttatgctgggac
agtgaaggacgcctacagcctctccatgatgtatgtctgacagacacaagtttgcttgtg
tcccttcaacaggaaggagcccctgagcaggcaggactagtactgactagaatgtgcccc
cctagcagtgacccacaagattctcagccctttcctcagcttggtgttgagtgggcttct
gctcattgtcacccatcacagttacctggggacacaagggaaaatgcaggtttagctggc
ctgtttgaggtaactcagtggggagcaagaagtactgaggcacagccctgtgttgcaatg
tgtctgcttcaaccacatggcacccctgcttctttcctccctcccaacatcccttgctcc
tgctgctgctggttctgttagaggccaggcaggaactggacattacaggagagccactgg
ccgcctggctctgctcacagctgtagctgagctggaaggtccagaatgattttcaaaatc
attttcaaaaatgtctcctccagggatttaggatgagggaggagaggaaaacagacccag
gagcaagctcaggctcccagccctgcctctttgattctgagtagcacacaaatccctaga
agtgggctgcaagtgcaggctgggcgcagagggccagcccctccacagcccctccacagc
ccagggctgaggcacactgcgtaggttctggccacagagctcaggaagactgcctggctt
tttcaaaggccttggacaagcctgggaggtatgagaaaaggtttgactagcatttccttt
gaagaaaagatagtttctctgtccattgtgagaaaaccacagccctaaataaaatgtaga
ggtttacttgtgtggcaagaaattcctgtcccccaaagagaaattccttcatgtactctg
ctgactcaagagaactgacagccatatttggacagctgccctctggttgacctccctgct
acctcatggaaaaaaaaatggaaggaactctactcagaataattatatttacatagcccc
tgctctgttcctcctcctctcccctctccctctccccctttcaacctccccctcccttct
ccttcttcccctttccccctcttcctttccctgtcctttcctctctcctcctcctcttcc
tccccctccctctaaggagaaaagggtgcttgcttctggaattcatcaacactagctgtt
tacttccatttgaagccagaaacacatttctcctcttctctgatttagtttgggtggtga
gggacttacaagatgacaatcacaacattgtcactaccataggaaatcagtccattctct
tcagatgttgaatgagagatgatcacataccagggcaggaagagtagtgaggcacgggat
aggaaagagctgagtccaatgtttttgaagaaggaattctgtggccaaacatactagggg
attgctgtgctcagaagattgttgcattgctgtgtttgttccacaggatcttttcccctc
ctcctcctcctcctgctcctcctcctcctcctcctcctgctcctcctcctcctcctcctg
ctcctcctcctcctgctcctcctcttcctcctgctcctcctcctcctcctgctcctcctc
ctcctcctgctcctcctcctgctcctcctgctcctcctcctcctcctgctcctcctcctg
ctcctcctcctcctcctcctcctcctgctcctcctcctcctcctcctcctgctcctcctg
ctcctcctcctcctcttccccctcctcctccttctcttccccctcctcctccccctcctc
ctcctcctcctgctcctcctccttctcttccccctccttctcctcttccccctcctcctc
ctcctcttccccctcctcctcctcttcctcctcttcttctccctccccctcatcccccct
cctcctcctcttcttcttcctcctctttctcctttctcctcctcttcttcttctctactg
ctactattatccttggagctgagaggggattagggtcttgtatgtgccagacaagcgctg
gacccatgagctacatccccagtcccctagaatattcttgagtttgttatttaggcgctc
tacctctccacaagacaaggacagttgaccatgtttcccagaccTCCCAAGGTCACACAG
AACT
Primer
(+)GAGAGCCCTTGTCCTTCTCA
(+)AGTTCTGTGTGACCTTGGGA


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