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Mouse element [ mm1317 ]


Position: chr1:99,435,074-99,439,318 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slco6c1 - D1Ertd622e

Timepoints:
e11.5

Expression Pattern
forebrain (3 out of 4 embryos) 
hindbrain (rhombencephalon) (3 out of 4 embryos) 
midbrain (mesencephalon) (3 out of 4 embryos) 
neural tube (3 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
TTCCATGAGCCTCTGTTCCTgaataggataaataagttggttcaaggataaatcacagag
gtctgcagttgcctgccatgattcttgctcactgtagtcatggatggaactgttcaaggt
cataaaattgtgaaaggaaggggatcccttacagaccctgaagaagttgactctgccatt
gaaatagacatgattgcaaggagtgttttaaagatgagggaagggagctgcaagggcctc
agattatccacttgtgaaaggggtatgagaagattattcttcgtcacatctcttctaaaa
gtcaaacaactaagtctgcatgccagcacaaggcatggaggggaaggggcctctggctcc
ttgggtggaactagaagccacatggtttctttgtgtcccaccatctcatcatcctctgag
caagtcacaaaggagaagtgctaccatcccgagtgaacctttcctttctggtttcttctc
aactctcatggcacacctaaaagatttattatggggggagaaagggctggagggggcatg
gctggtgtgaaatccctattagtctgagtattgagtggtttatcacacataactaccctg
tgacagattaggttcagtgaaagaaatggcctgtgagcagcatcctagtttgtcacttat
ctccagagaaaagttgccacagtaatgaggatgaaaactttgtctgacaaaccagcaaag
agtggaagaaacagagtgggattgcttgtggaaaaatcctctcaccattatgtagggcat
agagactttacatgaaattgcaacttataaggaaagtcatacataatttttatttgtaaa
tgaaccagttagataaaaagtaaagggtaagggccagggagatggctcagacagtgtctg
ctactctagcacaaggacatagatttgtattgtcattgcatcataaaatcttggtggatg
tggcagtatgcacacacatgcacacttgcacatacatatgtacacagcacaatagggagt
aaagagaagggagatccctggagctcattggccagccagtctagaaaaaccaatgaattc
tgggttcagtaagagctcttctctctgtctccagaaaagatatagcaatcaagaaagatg
tagacatttatttaatatatgcccacacagatatacacacacgtgtgcatgtatgcacac
atacagaaagtgagcatgttatatttcacccatttggtgatttggtctataaaaactcac
tgagcgctgtcctatgcaatgaggatataatcataaacccaacaaagtaccttgcacact
gccaatgcagtcaacacagcaataatgcatcctgaaactcacaaatactaaacatcattc
tgtgaccttagcgtggagggttaggctcttacttaaattataagtataggacagtatgct
gtttaattagctacctattataaaaaccttaacaactccctgttttctgtattttcattg
tggaaatagaaggagaagaaaaagagtaaatatagtacaggcacaagggatctgccaagt
atatttgtaggttaagagtaggaggcagagtattgttctctgccatttaacctacagagg
caaaccccgacaacccaaaagtaattccactattatcattctatataaaaccacctgcta
gtgcttttaaaacaaaatcacacagcacatttctaagtcagatggaaacacacgcgtagt
ctgaattactcttgcttccattagcatggatgatcaaaagtttactctgcgtgttcaatc
aaatctgtccccaagtgagtcctaaaatacagcaattactgatgttcctcccactcctgc
cctgtatgacggatcctgaaggagaagggatgttgaagcttaaggcagtatacttcctgg
tgcgtggataacgctgagaagggacgcccctccgcataggaaggtgaaagaaacgggtgt
ggcctgggaaaaccaaactcactcctttttgcaggatcaatgatgtcagaggcgagggtc
ggggttggagggggggaggtaggagagggagggaatgtgaactggctagttacttttctc
ttctaaaagggaatccacaggccattctgaaacagtactcagccaaggcaggcttcgaac
actacccaacaatagaagataacaaatgagagaaggggacagagtgagagagacagagac
caaggcacagacccgggctgtcagagctccgtgagaaagaacagtggcattgtgcctgca
ttggtagaagtgaccctcctgctatttcagtctcaaaggaagccccctctgttcaccttc
tcattaaaacagcctctccagagaaaacgctgagaccacacaaagcaggacattcatcac
tagggcaacctatgcacgcagtggaagctggcgggcacaaaaggctggctttaggctttg
tggggaagctgctgctctctgcctgtcttggtgtacgtgagatttagacagtagaatggg
atggaaatcaaggtttatattgtgtttgcctgttgtaggtgtacttataaagaatgaaat
ccccatttaattcaatgttgctttgtaaagtaggcagcaacccatccaacaccaagcctt
tatttcccaatacatcatcgtcatcatccacagtccattccattttatcccatttatgac
aattcaatcaatgttgctaattatcttcaacatggcttaggcagagagtaaatctgctaa
agcatttgggtacatgtcttctttgtttgggcctatccactcccattccctccccttcat
ccccactgcaagaccacacatacctccatggaacactacaatgcaccaaccaacagatca
aaaataaggctacagtgccattcacacaaacagcaaaaattcttgcaagccctttttgcc
ctatgtagttaaaatgtatataaatgcttggaaacaatggtctttaaaaaaacaaaacaa
aactctccattccacagtgacaaggaacaaatggtcttgtaacaaaatattagcattcac
ctgagcaaacatcattccaccaggcaccctcacagaccttctttttctcctgatgatgga
actaaaccactaccttcagctacagtgctaatactgtacttcagctttgttttaatttgc
tgttaacatgcatttttcagagtaatgtcattcctggagaaatcatctttagcatattag
aatctcaagcaaaaggtcctctgtggacacctggggcagattcttagatatagaatctgt
gaaattagattctttttccttctttatgtcttctgaatcaggatgaattggtttttatct
gtttcataactattctttccttttgtcctaaatctatttttaaaaagtacataaacaaaa
aacattgtaaggcttgaaatgaaatcttaaagttgttaatgtaatatataataagtatgc
aaatgtaagtgtacatttgcatatgcatatatcttctaataatattcaactccttacccc
tcctttttctcctcactggtagttttcctctttaaaacagttcccattctacctttctgt
cataaagaaacttaacagctagtgtggtggtgaacacttctaatcccaaatttaagaggt
agaagcaagaagattaaggattcaaggccagaatcaactactcagtgagtttgaggccag
cttgaactagataagaccctacctcaaaaaaagaaaaggtaatttaaaaagaatttcaat
tggatttagctaactctttcacatttccaagagaactgggggattaggaaaataatcaca
aacataataccaactgtgcagtttgggtcttgtctcacaaagaagggaatgttaagagat
cgaggctccatagtagtgctattgaaagagccagtggacccttaagaaaagggaccttgt
tttagttaactctatatcactgttgccaaaattcctgacagaaacaatttcatagaggaa
tgtcgtatctgggctcacattttcagatttatgaagggcaaggcagggctgagtagttcc
catcatggcaatcctagacaccaagaaaatgggacagcagcactctccctattttctcct
tttcagatatttatttcagatgctcactcagggaagatgactctcacactcagggttgca
tccatattcaaggcatgccttctccCCTCAGCAAGTTCTCCCTTG
Primer
(+)TTCCATGAGCCTCTGTTCCT
(+)caagggagaacttgctgagg


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