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Mouse element [ mm1307 ]


Position: chr13:34,377,263-34,382,362 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slc22a23(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (3 out of 5 embryos) 
hindbrain (rhombencephalon) (3 out of 5 embryos) 
midbrain (mesencephalon) (3 out of 5 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
CCCATGAAACAGCAAGGTTTatctccctaaccacagactagagcaaaggatatttctcct
ccaaaaagctggttgcagctttctattccctgaagagcaaagaccaaatgtcttgtatca
ttcacattccttcagaagctaggctccctccctggtacatctgtacctaggtctatgtct
ttatgggtaatgaggcctgagaatcatggagcaattggaagataaaggcgagaagggagt
aggtggcagcttagccatgtgataactagtgagaaggaaagcaggttccaagatggcttg
agctcacagttctcctgcccacaagcctcaccctcctaaactctgagatgatagatgtgc
gccactgtggtatgctcttgaacaagagttctgaaactgtactctcatgttagtgaaagt
tttaagacgagattaacacaggtgtgttcaaggctctccatttgcaatgccaaagctcaa
tatcacacatttctgaaacagtcaatttgacatcctgcatcaaaaaaaccaaccaaccaa
aaacaaagtaagcaaacaaaaacagaagcaaaaacaaaaataaaagaacaaaacaaacaa
ttgaggccactcagatgtgccatttggatttatggtaactgaaatgtcaccatgactact
gcataactgcaggattaggggtatgggtaaaattgcagcagaactgagaccccacatgta
caggatggcacaggcctgaggaatacccctgggcctagaggtcaggtcaatgactgagac
aagtactctgtccacttacctccattaaagggcatctttgttagcaggaagattaacagg
aatgggcaataataatgtccccaggttctattacagccatacatagatgaaatgtatact
cagtgaatcctttaagtcacaaatataaccaccttcctgagatggagacgttgcagggac
agactgagatacacccaggagtaggaaagcatgatgctgaagagttccgtgatgacagaa
cccttaaggttgttaatgccattttggatggcacagcgatgtgaaggggcaccacatgcc
ctgcaggattcgagtctaagtgccaaagtcaatgaaataagaaatagaacctgatgtgaa
ggtttctcttgtttaatctctccagggtagacaggtgactgtttcagagaggccagtaga
gaccacagaatgtcctgtatttgacactgtatgctgtcaaatacttctgttcttatagtt
atttataagttgtatgcactattgcaaattccttgtgtctatagacattttcatattttc
acaacatacttgaagacaacagagctaataggttccacacagcagttacaggcagtctgg
aggcagtggtttgaattctggctcctcttcctcactgaataccaccttgtgtaagttatt
tccttacatctcaggcaaaatttctacaatggaggtaatggtgctcactggatggcaaca
caggcagctttcagaagtgcctacacacagttcaagttcagtaacaccagctttcatttg
cttgcattaggagcacattcagtgaggtccaaggctgagagcatcgttatccttatctgt
cgaaaaggcttttggtaggatctataattaatataagatgtaagccagctatctatacac
atcaggagacatgcacctgcaacttaccaaagaagctgaacctggaagattctctaggag
tagctaaccgttagcaagccacagtcaccacgatattctcaataggccttcctgcttgct
ccttcattgaatcagtactcagtgatcgtatacatggtgctccatgttagagagcattac
atggagtgcccaggccaggattcactatatgcctgattcctcatatcagggctgtggatt
agtccttctaaaaatgtgtaaggtggagtcataatcagactccagacaaaatgaggatga
acagtgagtccagctaacacagtacaaatggccaaggacagaaggccgtggctcctagca
agcacttcttgtgcagaaagggtagctgcattcttccactctaacacaaagatagcaacc
agatttactaaagaaccacttctcttcgtcctctagatggcttccaccccaagagccttt
gcatcttaaagccacagccttctttctataaacagcaacaccagctggacaaaatggtgt
cagggaagacagggtcaaaaaccccaaatcacagtagggcttcccacaattttccctctg
ttatgtaaaatagacgtatctgcagctgagcaggagctaaaggggccttagttcaccctt
gcccaacaagggcgatctgcctttggttgggagggagttctgagccctttcccagaacca
acacaaagcaaataccaagaatgacaggatttcaaaaggtccaggttagaggagcccggc
actgttggtctctcaaacaacagcaccagagtgagctttctgtggccacaaaagcaccct
ttgctccgggaatcatcaaaggttccgcagagaggaaatgaaaacacagcgccaagtgca
gagcgcccgattttcccctccttgtgttccatgaaggcagttcaaaggccctgcctgcct
gcgctgctgtgctgttcactccatcacactgaggcagaataaaaagggaatttatgtgga
cgcatgtgggaagggaaaggaacccctcttctcaaaatctgactaaaactttttttccag
tttagaactccggtcaaattaacagcatgtgttgcaaaggctgctgaaatagttaatatt
cccttcacataaagataataaaaattaaagtaacgatgaacaaagctgaaggcctaaatg
tacatgaccttgggtacagcttcattcctttccccatgaccagtctaagaactgcaaagc
tctttacaatgagctcatcctatcttcctgcatccctgcctatgggctagacttttacct
aaccagctgtaatcctgttttgcccagcatccccaggaacccagtgataagatagtaact
tcaaacccaaccaagatcttaaatctgactattgataaaacaatgcactggagctctgag
ggaagtgtatccccaaactctcagatatgcctctctttcttctgagtgcctctttttctc
ttttgctggttcttaagcctctacaaaaatacctgagcatgagttcttaacagcttttcc
ctaaagcaggactttgaaaatacaaacaaaacaagcttggtgctgcttaagtaaaactgc
tttcagcagcttttcctgaactgggagcgctactctcacaccggccactttacagagaac
gtccactgtcatccctcttagtaagtcagacaaccctttaggtcaaagcataatgaatgg
ttgccttaaaaatatggcacatattttgtaagttaatattttaaaaatatagaaaaggaa
gcgagtcatggtgaatgcctgtaatcccagcactgcacagttgaggggtgaggatgctgt
aaacaaaagcccattccaagctacagagctagaccctgtctctgaaattgtataacacag
acagacagacagacagacagacagacagacacacacacacacacacacacacacacacac
acattcaacgtgctggtggaggttgcagggaagtgaggactatagctcagtggtaaagca
ctggtttgatacaattaaagccctgggtctacaccccaccccaccccacccctaatcccc
agtatcacaaataaaataaaataaaataaaataaaataaaataaaataaatatggaggaa
atggatgactggaatatttacgacactaaggatcaataatttagggaatgaagtagagct
gctttgaatatatggaaacttaaaagtagctacttctgctttcttctgtacttttataag
ttggttcatgattagtgatattatgctggcccaggagaatgtttctagattttaaagtgt
tagaactcttacctcttacacacacacacacacacacacacacacacacacaaacttggg
gggctaaaaggggcaattacaaagcaaattcattctctctctctctctctctctctctct
ctctctctctctgcacacctcagtgagcctgctttgcactgctaagctggggactcccct
tagcccagtctcttttctcacctagagtcccatgcctgctgtgagccaaagaagccctca
cccacaggtcctgggagaggaggagcagctggttgtctccatggaggaatcctgccttca
gcagaatagtgtcactctctgtcttgtcactgggtgcacacacactagctaaggacaaac
acatcttgatgactgccttcatcctctccaccatctgcatgagttctcagaggtgagaaa
actgactcattcaagacaactagagagcagtaggcttgggttagggaccaaatgatggct
agatccagctctttatgagctgcttacaagaagtcgtgcatgtgtgtgcatccttgggtg
cacgtaggagagaagcaggtaatgagcatggtgatttgtcatacattgcctttgagtgtg
gacaacacaacatcaaccaaaaatacaactgcacctgggctatgtgtctagatgtctagg
aagcacataggaatgtgctttagggacctgaaggaaaagtcattattgacataccttata
atccagttttcttctacccaataataacaaacaatggttaatataaaaaattatccttct
gtacaaagatgtggatgagtcacattaagtataaattatgactcttaagaatggttgaag
tggtaaaacttttgagatatatatatatatatatatgttttgcaaaagttgaaaaggatt
gtaagctacttagcaagacatacgacacaagaacaaggtaatattctgaggctgacagga
attacaccctatgcttaaagtatttcacattaaatcactaaactgaattaaagctgcctt
tgccacagttacccctgacataccaggcatttattgcttcATCCAAAGGACACTGTTCCG
Primer
(+)CCCATGAAACAGCAAGGTTT
(+)CGGAACAGTGTCCTTTGGAT


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