Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1284 ]


Position: chr3:157,573,564-157,575,297 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C3orf55 - SHOX2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aACCATGCATAGCTTTGGGTTTtacccttaaaagcctcttgttttaaaaaagaaaaaaat
aatccaaaatctgatcaatagcagagaagctgtaatactgatctctttcaccagagatat
ttacaaccgaatagggctttggagccaagattctaacagcaatgaaaatgatgtggccag
agaaaggggtaaagaaagatgtcggcgataacatccttgggataactctaagctccatta
cactatccaaaagaaatataataggatttgaggcccaattattacttcctccatctaacc
cccttcatttaacatatcattagtatttttagacgagtccctcagggctctcacactttc
gtaggtgagtcagacagcaagagcagtggcagctatccaaggaaactgatccttccttta
atgctcccttctggttacctgctataatgcaattatcatgtactgaagcaattttcggga
aaatgacttgacaagaagaactctgtcattttataaacaagaacaaacgttgtaattgga
tcttaattacacaatgttctgagaggttatttttatttctttgtttgtaatgcaattatt
tagcttccctattttagccttgaccttgcagggagagggtattttccagtcagcataatg
ctttatctttgaaagctgcaatcaataaggataattaatgatgccggctgcaatgatagc
ctcagcaatcattatcccacattaatccctgcagtcaggctggggtcaaggccatctaaa
tcattcacccaggggtggagaaattcaaataatttaccaatttaaatccttgcaaacaaa
tcccactttattttcaaagcagtttgaatgctggctgggtttgttttgtgtattttcact
gggtgcttttttttttaaatgacagagtatatactttatattagcattgcggttttgcta
tgtttgtgttttgataaattaatgtaaaaacatgcagcacatgaatgctactgagcctgg
aggtacatggcacatctagcatttcaaacattgtccctagctttaaaagaagaaggggga
gaaagagaaatgtgagaaataggggaggggaaagaaaggaaagggaatggagggcagaat
gagatccagtggctcaggctagcagagaccctgggaagaaggttgaaaaattacaagttg
gaaaatctttgaggtgaaactgcaggcttattcagtattgtggagaaagaggactgttgg
atgtgaaacttcatggtggatcttgcagaacaacctctgttaaggtctatttcttcctaa
tttttgccttttgtaccctgcctttcccaaacaggcaaattggatgacttgatgtatgct
tctaattgtctgcaatagatcacaccctgttatgaagaattccactgtgctccctgatat
ttttcaatgatttaattttaattaatgttttgctataaatcatacgcctagtcggaatac
actgaagatgataccaaattgatgcctcatctatgtgtgtgcctgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtttccagaactgaagtagcaagtgaagagttattttattccattg
ggtctcaataaatatttgatgatatgatttggcctagtttacctcagtccccttttataa
agtcatgtaacatataggaagaaatcgtagcagcTGAAGTGAACTTTCCTGGCA
Primer
(+)CAccatgcatagctttgggttt
(+)tgccaggaaagttcacttca


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.