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Human element [ hs1264 ]


Position: chr3:55,788,950-55,790,828 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ERC2-IT1 - MIR3938

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTGCATTCTTTAGGTCATTCCttagttaaacaaaagtggaggtggggaaggagacacag
caattgtcctgatatggaggcacaaattaatctccatttttatacttaaaaagtaattat
aaataaaatgctcacagtcctagtgattggctattcatcttcttttttttttttcatctt
agccatttcctcaaagatccatctgcacttcatttatttatttcccccataaagagggat
tataactctcttatcccaaatttgaaatactggtttgtctgtaaatatggaagcctagaa
gaaaccacagtaattggtgcttttagctgcccacttaatcttgcttaagttaccagcatt
cacgatgaggaatgaccgagaggcacaggttgagtaactaccaggatggcaaatgcaggg
gatgaggttaataaagattattgtcaggaacctcagtgatactccaaagcatgagaacca
acaaatcacaaattaagagcacttgctaactagaagcaaggtgacagccaactgcggtag
ttaaggcattattgcttctgtaaacgctaagctcaagtataaagtagacatgtaatcttc
aactccccgaacaccccaatttggccactaaagatgctgttttacatttccaaacatttt
cccctgtcactactttttatacttcagttctcaggttgtaagtatttgttacttgcaaag
cagccccctttgaacactgaatcatgggaggcatttgtaactaactgccaatgctgcctg
ccaaacaaaaactccctgctggtgacatgaccacctagtgacctctaaaaatgttgtaac
aatgtgaaaaatagctccctcttgtaggaaacagcaattttttaaattaaacgtacatcg
aacgttcgcttatatacagataaatggtgttcagagtcaccttctctgtttccaatttca
atcttttgaaacccagcccaaacctaaataaataaatgttgatactaagaagaaactaag
agctcaagagccttgtgattttgcaaacagcttttttccattttcgaaaatctaaactcg
gggccagacacagaacaggtaatgaaaaggaacaggcttggcagtccctctgtggttcta
agctgaaaaatacgtcaggcagaaataagtggctataatttggcaggcttaatgtcttca
aaagtttgcagcttgctagagaaaaaaaaatttaaaacagttataacatttacaaattga
aacacagtcacgaagctaaaaagccagatgaacataatttaattatcctcagagttttaa
acatacttttatcatcttcaggtgtttttgtacctacataatagaaggcgctgataatta
ttaaaactgggggtaccaggaaactttttgatgctaacatgatcttaggtgactgtaata
ctgatgaacttagtctatgcccttgacatcaaaatattcttggtctcactttaaaaggtg
caatggagcttcccatatgtgccccatgggacacaaggaatgggaaattggacatgacag
taagtatttttgaggctgtggatcactgtttttccggttagtttatctttctaaaatttc
aaaattaaaaatctcagagcaacagaagtatgacatgtcaaaggctgtttgactctaatg
tgtctcttgttcatcctgacatcttctgatgaattatttccaaacactggcccaagccat
gaaaaatcaaatcagcttgaaaacaaaggggcaccaacaactgtctgtttctaagccatt
aaaatgcctggaagatcactctttttagaaagaatagtcagtcctttttacctccttaaA
TCTTTCTCGCCTACCACCC
Primer
(+)gctgcattctttaggtcattcc
(+)gggtggtaggcgagaaagat


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