Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1253 ]


Position: chr2:199,226,864-199,228,567 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927619(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTTTCATGTTCAGACTTCAGGtaaaaactgaacaaactttagttgaagaagatgggtga
atactgtaatttttgtagaacatcattaactaggttaaataattcctttgctatttggga
accagataaacaagtttctgtagagccctttattaagtgtgtgtgtatctcccttcgtct
gtgtgtttgtgtgttctggggaaggggatgaaagagtagcaggagttgtaaattagcagt
ttgtgcaatatgcctatatgatcaaaaaatttatgtagaatattacactgttgtttttca
gatatattttccctccagatgcagcaaaaaagttttcttgatgtctaatcaagcaatgca
gttttttcagatttgaagaactcagaaagttagtttttttattcttcttcatttaagtat
tattttttaattgcagtgtattaaacataaaatctggtacaatctttaaaaataaatagg
acctaactataaatgggccctgttgtgtttttatctttgacaagcaagtaattgcttctc
aaatttatcagtttgtttatgcaaaaaccatttaccaagcctagctcaaaagcatcaatt
tcatcattatcatcttattaatttagccaagctataacacagctgattattcctgagtaa
tatcctctgcagcacatcatgtgtggcaaaaccatctgtacagtacctatttaataaata
aaccctcggctaaatgtctctgtttattgagaactaatgtttatagaaaatataatggaa
ctcaataaataactcagcttcatcaacctgcatatgaatcagtgagaagaatgctgacat
catcacctttcaagtaccagagaaagcaaaattacccaaaagagatatagagtcagtatt
aaggcattaaaactgcaatgaaggcatattaatgcttaaaacttcattgttggcagtgga
attggcacaatggacatattttataactctaggaatacttaggctttatggctgcttctt
tgttgactgccttgcacttaatgtagttttccactttaaataaaaaaaaccctcaagatc
ttaaaaaaaaaaaacaagaaaattgctgattctaagcattcatttttaaaataatgcaaa
ctgctgattccaattgttcagatttaagaaaaaaaaaagccaacttctttaactccatgc
ttcctgaattcatattagtagtaactagatattttgtggcaaaggctttttaaaaagtca
caagtatttttttaaagagattattctgagtgacatcattagtactgagaatgtgagaag
gatttagtcattttgcaaagaaaggccaacttaggttttgaaacattagtaatattcatg
cccagtatataaaagtgcacaattatttaacatactcacattgattctcgtcaccacact
attttaaaaatttgcattaataacttaaatttttaagctagtatgaatccaatgaagcaa
agtggattattttgaaatagataatgaaaatggagccattggttacaacctgtttcaaaa
gtctatctgtcctcattttactttccagaaataaaagttcattgacagagaataaacatt
gtccttattcaaatccaaggaatggaccttattgatttttgaaagcaactctatttttgt
gcatCAGTATGGCCCACTTCACCT
Primer
(+)tttttcatgttcagacttcagg
(+)aggtgaagtgggccatactg


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.