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Human element [ hs1251 ]


Position: chr3:157,775,742-157,778,000 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C3orf55 - SHOX2

Timepoints:
e11.5

Expression Pattern
hindbrain (rhombencephalon) (3 out of 6 embryos) 
midbrain (mesencephalon) (3 out of 6 embryos) 
neural tube (3 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
TTGTACATCCCTTCTACCATGAAAtatgtcattcaagtaacatgaaatagtacaataata
ctctcaaactgtgaataactcctccctaatacaataagtgcttgaatgctgatggagatt
taatttgcacagtagaaaacataaacccatccagacacccaaataattacatcattacct
agtcaggtgtggggagaagtaggtagaaaaacaaccaatacacttcatgacctgttagct
tctttaaaaaaaaaaatcataacaacaaacttgtacatgtgcctacaaatattcatgcag
actttctgaaacgaaagcttatagcattatggcattcacacaataattcaatctaattgt
gtaggcaggctgtaaaacggctgtttctcagatggtttcctgacaaaaaaataatgttaa
accttcttctctgacatctaatgtttcaggtttttaaaaatactatataaagactgagat
ttatttcctaagatgtttcattaatggttgtggcaggcagctggcctgaggtttgacaca
caataaaatccatgtcaagaatattaaagatagtgcaaaagataactatgaatttacatt
caaacaggcttttgacaaagccattgcaacaggctcctaatcaggtcttgagacctagcc
tgccctctctttaaacccgtgatcctgaaaaggagctttaaattggaaattattacacat
taaaacctcaacatgggccagatcgaagtggatcgatatcttgccgagcacaataaatca
gccttctgctctgcggttactgtttgctgaacatatttaaattttcttgtaacaaattaa
ttccaacattttctcttgattgaattagagcaagtgttggagctgtcacaagtatttcgc
tgcttcagggagacaaattgctcgtctggacatgggtaacaagccaaagtgttgagtccc
tgataatctttccactaattctccattacagcaaaatgaagccataaatcaccatgacag
ctgatcgatgtaaacattgtttccgccatgattgccggagctccctgtggagttactgtc
cgcttacaattcgctgaaattactccccgtgcagcctccctggaaactacgggagccttg
gaaccaaagtcactcctgcctgaaaagtaaccatctcatttcagacctcaacccactttc
aaaatagcaaatattaatcaaaatgccctatttagctacaggctaggtaatcttttaaag
ctaagaagtattccttaggcaatcactctttctgcaaaaaaatgaaattttaaactgcta
ttttataaaatatatttgtggaaatgtaacaatgtcagcctcaagtactgtcattttctc
ttaactaactagtggcaagttggatgaaattacttgaccctttatcgagttctactaatg
tgttctaaaaaagaaattaaaccaccttgtggcttgccctatggcagacttccatgcaca
tttaattccagaaaagatgcattaagtagttctggtagaactaattcacagactgagcct
cccgtgttggtaatctgtctgcataatgctctactactattcaaggttcttacaaaacat
tgcagttagttacaggacaaagcaagagtggtggttacattcacctttgaatcggggcag
taatttttcattccggtagtattccaagttttcattcttgtataataggattaggaattg
ccagtaaaaatgcatagccctatcaatattctgaaaataattgaataattttaatgatac
atttttaatgcaacaggttacttacatgatggatggatttaagtaataactgagttctaa
aaagatatgccaaatttttaaaattcaggtatttccaagctaaaaataagacaaagcaag
aaacgtgttgatacaacaggatacacacacacacacattatgtatatacatatatacaca
tacattatatatacacacatacattttatatagatatacacatatatatatacacaattt
ttttaaagagatggaattttgctatgttgcccaagcaatactctcacctctccctcctga
gtagctgactagcaccaacacacccattttatagcttatatttttatgtgaaaagacaca
atctcaaataattgcatgcacaggtagattcatactgtctatctactaccaaaacgtttt
ttcttttataatttaatAACAGTCAATTTGAAGCACACA
Primer
(+)ttgtacatcccttctaccatgaaa
(+)tgtgtgcttcaaattgactgtt


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