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Human element [ hs1243 ]


Position: chr2:237,165,066-237,166,143 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ASB18(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGATAGTGGGGCATTGGATGggaagctagaatcaggctacagagagcatgcctgccattt
ccaattagttccttcggaatgtttacttctcaagcagagcacttgtggcaggaaactgtc
gtcatctcagaaaggtagaaaagcctctccgctattattctcattgctttttgttctttc
caaactctccagtgtgcttggggatgatgttaatagatggatgtcatcagcatacattat
ttctttattagcccgtttctcaattttgattctgaaaataccctgatttagtctaattgc
aatttcactgtgttccacaggcagtgacagttcatacttggggggagctgagacgcgacc
ctgtaggattttttttcttgtccatatgcctttgaagccggaccattagctctaaggcat
gcatctcatctcatcacagtgtcattcaacctgcttctggggaaaaaaaaagagcctagg
gtgtgtgtctcgtagaaagcaaagaaacattttaattctaggtggtgggagatatttttc
tgtatttaaagagagggctgctgcagcagccattttgttcctaaataattcaactatatt
caaagataatctgatgttattgtaggaaagtgtatttctaataaattccacttgatctgg
gtgaatcaattcaggcagcgcataattgagtctgttagcaaggactttagcaagaatttt
gcaatcagcgttaattaagaagatgggacaataatttgtgcataattccggatcttttcc
tggcttgtgaatcaaagtaataagagcaatgctcaggctggtggtgggatagtgtcatta
ggtgctgatttataagtacttagaaaggtttaatttcattttgcttcgagcagggtctcc
ctgcccccacgctctctggtggagtgagcagtcaagacagcagagcgcttctcctcctgc
ctgccctgccgtgggtgacctctcgcttcccatttctgtttttattctccagcctagcac
cccacttacttgcccatgattttttgggattatttttGCTCAATGATTTGAAACCAGG
Primer
(+)AGATAGTGGGGCATTGGATG
(+)CCTGGTTTCAAATCATTGAGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.