Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1234 ]


Position: chr20:39,347,264-39,348,213 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAFB - TOP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCTTTCACTGTCACTTTGAGGtaaattgggatcttaggattcaggagaagcctagaagg
agaagagggttacttcccttgagcactgctgattgtccatatctctctgttaaaagctgt
aaattacactgactgacacggagagcccggcagacgttcccgagaactaccgcaagctct
cggcattactctctcccatcagagctgcactgtctctgggtccgtaactgagcaaacacc
ctcttgcatttgtacgcctctcctgggtgccaggtcaaggcaggaatcacctggacctct
cacctccccagcccactctccatgggtcatctatatgaacatcaaacccaaatcacaagc
ccccaaatttaatttatttctacctaaacaagttcttttatcataaagcaataaatttgt
cttggtgctagcaatttgttgcgggtgacataacattgcaaattgattaatcgctactgt
acgcagcaaaatgagaaaagcaaggaattattatgaatagcgtccgtcttttacgggagg
gattcattattcaaaagtgcttgctggtgcttacatgtgccctgggtgcagattacatcc
atttgcagacttcccacatcatgcttacacaaatcaacaaacgtgcatttattaagacgt
agaatgaaagctatttaaaagtgaaaaatggccttttgcattacttttcttcaaggaagg
caaatctgggtgggatgttcctgggacaagtccccacagttgtcacatgagtgtctctgg
gttctatgcaatctggctcatgcaggtgccaacaaatctgcctgctatgcctttgacagt
cccaggatcagaaataccccaccagtgattttgcaacccttgctatggctcaggagactt
aagcaattggctgtcactgcctgctgggGAAATGCAGCAGAGAGTTCTCA
Primer
(+)TCCTTTCACTGTCACTTTGAGG
(+)TGAGAACTCTCTGCTGCATTTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.