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Mouse element [ mm1232 ]


Position: chr2:22,475,138-22,476,467 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Myo3a - Gad2

Timepoints:
e12.5

This element was tested at e12.5 and did not show any reproducible staining at that time point.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GACTGATATTGGCGGAGGGGggcaggagttcgggtgtccgcgctggctttgcttcctggg
cactacagccccacctgaagcaggtgcgttagggaggagttgggctctgcagcttgccag
attttaattctggcttccagcggaggaccctgcaccccacggtcctcgcaagagtgtctg
ggaaggtttattcggttgctgagtagagacgcaacagacagatctacctcagcccctgca
ccttggcttgataaggctggaaaaggaagattgcaacgtcgtggttgtttccaaaccctt
tttctatctagcctttttcagtctctcaacatttaagcagcaaaagaactcgagagagaa
aacttgtactaaatatccttctttgaccggccctctcctctccccactacggggatttct
gggtggctcacagtggacaaggaataggtaatcccaccaaaccttgaggtgggctaaact
ggagattttggtatgggtctcctactgtaaagagaaagccttccgggctaacggtattcc
tttcgcagtctactgcctcctttgtgaactaatgactgtaattattacctcccagagctc
ttttgttatcaacaacccggagccagaggggggtgggggatgggccctttgggaaaaggg
aaaaaaatttacaaagcaaattgctgtctacgaagggttggttttttaaaaagacaaacc
caattccagcctgcattcgaagtggggagtggcaaaattttttttcaaagtatgataaga
ttttaaaaatactcagagctgtgggattcaattgcatttccacagtatcgctttaagtta
ctatttttgacgaagtaaaattcagatgttgaaaatctgtatctcttgttttcatccatt
tcttccttggaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtttaagaaccttttttttttatttccgaccactcatccatggtaaaaagctt
caaccccagccagctggcttgaagagaattattttgcaggatttagtatggatttaaaca
aagactcaggctctccaagtcttgttggcaaggctgggcggaagcgccctttccaggagc
tgttacctctgccagctgaagccaccaggcctggaggaccctaaagacttactaagttga
ggcctagggtcaaggtgactgccttcccttagagacacgccttgggtagcacctcagcag
tgccaatctcaccgccctccccctccccacctcgggccactcaccggaccTCAGTGGGCA
TCCTCTAGCT
Primer
(+)GACTGATATTGGCGGAGGGG
(+)AGCTAGAGGATGCCCACTGA


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