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Human element [ hs1232 ]


Position: chr2:58,891,096-58,892,548 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01122(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGTTGTAGGTCAAATTATAGGTGAACtgtcatatccccttatgtctatgaaagcaatatt
cttcggagaaaaatataaagtatacatttgtagcttgtctgtatcttgagagtcttcttt
ccattctatattttggaagctcaataaagctggagtttctaacctttgggtcacaacata
tacccctgattaagtttctctggcttcaaaagtagctacaagaatgagaattgttataaa
ggggggaaagctcttcaataattaggattcatctacaactagagcattttattaattaca
cattgtaatcacatggatagtcacaaaaccaatcgtgcaagtctgtatttagagatttgt
agacagaagacttaacgtaaacatagaaatgttaaacctactcaactgtaacctgcaaag
aagataacaagaaggattctgttctctgtatgatttgtgaacaatgctaagtaaatattc
atcattaatatataataactgttgcttttggcagttcacttttcatttaatttgataatg
tgtccagtaaatgaagtggtacaggctacagtgttttaccaacacaattgcatattttca
atcattgttaaatgaaggcagctcaaggcaaagctttaacccccactagttttgtgtgtg
ataaaaagagaaggcgctatcaatctttattgtctgtcttgcttactgtaattgcattca
atagtccgctgattctgttgtctgtgctaatgtcaggaacagaggagagccagatgctca
gacttgatcatatgcatccagtgaccactttgataagttggcagcaagtcgctgggtttg
atgataaattgttaacgctatagattatgaacagctgaacactgcaagtgtacatggagg
aaacttcttaccttgttttaaatctggcatcatgatgctagctaaagggcatgtcaatgt
attattcaaatgcatcttgcactggaaatgtgccaatgactcattgtatccctatgaata
gtaaaagcaacaacaacaacaacaaaaatccacagtgatttgaacatgacattaatggtc
ccaggattatgaaaagcattttgaaatactgtttaatagttctgattatctaattcaacg
agaagaaagcttctgagttgtattcccatttaattcatattaaatcatgttcttcctggt
catttctgttatattagccgataatgaggaagttttttaaaaacaaaccgatttttcctt
agttaaaacccatggcagtttgcttgtgaaaggacatatattggagctgggaggcaagca
ttgtgttgacatttttgccaaggttttgttttatacaaatgctgctgctgctgagagaga
cgtgacataggccatttgtacagggtatataataggtcttatttctaCTGAGTCCATGTA
GACATTTGTAAAA
Primer
(+)TGTTGTAGGTCAAATTATAGGTGAAC
(+)TTTTACAAATGTCTACATGGACTCAG


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