Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1230 ]


Position: chr1:164,197,827-164,199,172 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100422212 - PBX1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGAAGGAGGTAAGATGCTGGAAatctatttcctttacaataaaaatgggacacttttttt
tgtattttcttaaggtcaaaaatatatagaatcccaaccacacgcaggatagagatggaa
aatatgatattgtaaaggagcccaacaggcctattatttaaatgcctccgagtgtaggtc
ataataaaaaagctataacatttgaggaagatatgccctgtggtaaatccaccatatttt
atgataactcctgcatctaataaaagcatcatagatttgtccagttcacacacatggatc
tgaaaaacatcaagaaccagctgagtagagtagacataccctcagtgattcccctctaca
cctcaattattccatatcagtggaggtaaaaggcttctctgtgatttgtctgatttgttt
catttggtgggctccagctcctcaaccctctgttgcatctgacagagggaacactgggca
ggtacatgtttgctcagaggcactctcgcccttctgcctccacccataaatcacagtctt
tgaggaggcagccacctctgggcagaacacagcaagtgttgaactgtgagtaataattta
taccgcagagtaatttcagaccgagagtgaaaaagatttctcgaccctcccaatgctgaa
aggggacgtaagtcatataattttatgccagcaacacatgtatcatatgaagagggaaat
attctttcgatgacctgagtgttgtcattaaaatatgtttagccaaggctgtggctcaat
ttgaagcccatttgagggtatgtgtcatacttggtttcaagcaggacttgaagccaattt
agagagtgtgtgttatgagaagtcttcatgttagaggtgtgaaatttacagtcaatagaa
agtaactttctgattggaacttggcccaaacattgcaatgaatgcagtgggaatgccatg
ggacctgtaatattcatcagtgacagattctggggtttaaatgctctctccaaccagagc
cagggcaggcaggatgcagaactgaacaaaaaccataaggaaagtgtgtaaattaattaa
gttcttcccgacactattatttaaaatttattttcaaagttgccagtaaacttttgttca
ttataacattgacaagtagatctcctaatatgatccattttctttatccttctctcctgc
ttccaatcttcgcaatttggtaacttttgcagtctcatttagaacatccatatctctagg
tgttctaagatttttggcatggaagttatttcagtatccaggcattaaccaaagtcatca
tgaCCATTTTCAGAACTTCCACATTT
Primer
(+)TGAAGGAGGTAAGATGCTGGAA
(+)AAATGTGGAAGTTCTGAAAATGG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.