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Human element [ hs1223 ]


Position: chr7:21,239,775-21,240,922 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RPL23P8 - SP4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGACAAGGTTCTCACATTCCAttcatctgtgtggtaaaaatgacctattttccctaataa
ataatttgtatcattcttaagcccattttaactcctacaagaggccacttcataggattt
agcacccttgagactttgggctaataatcctctcccttccccaaataacacaatttacag
cccaatttctattccccagtagaacaaaatgcacagaggcaacttcactagaaagtttgt
ttttcaaacgctgttaaacgatttctttgcaatagtttcagcactgcagtaaaggaatca
ccaggtcacagatgcctggtttctattgattctcctagttaataaagagttaaacagtga
agtgtggtcttttatttttattttattttattttttaaaaaggcattttgaaggtgctgg
agagggaaggcctggtcctaagtggtcatgtggctcccgccattcatcttggtagtgact
atctgtcaaaagtggcaagagtccctgttaacagccctgacctgagcggtaatgaaggga
gagtgcacggcaaagtgtccattatcagcaggtcgggagcagtaaattggagcagtttgc
ttcaatcttgctgcaagttgaaatgtaagataggtggggatcagcaagaggcaattttat
cctatgatcatttttgtcagatcgcatcagagtggcaacttagttcgatgcatgatttca
attaaccaagtctggccgtaatgcttccactgccgggggaagctcttttctgagcctggg
ttcctcattatttattatttaaacccactgaagcacatgcaggtgagagaaccttcgatg
ttaggaaaagggagaacatacgtaaatggcaacggatgcaaacagacctcacatctgcac
aacaaggatcacagcgtccggggtgggccgggggctgggcgggggaggtatgtgcggcta
aaggcttatctgcaaatttccacactcataaatctgtttttaatgaccttcaactttgaa
tttttaatggattgacttgcatgctgtctagtctttgacaaaaatattagccttttgggt
ggcagttttagggaggatgaggtcacaaaattctgtacttgtgcttaGTCAGGTGAAGCT
ACTCCCAA
Primer
(+)GGACAAGGTTCTCACATTCCA
(+)TTGGGAGTAGCTTCACCTGAC


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