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Human element [ hs1214 ]


Position: chr3:70,701,489-70,702,904 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01212 - FOXP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGAAAGAGGGAGGGAATGTCAGcctagaaggcctagagatctccagaaagaagagagaaa
tgttcccgtctcccctctctctaggataaacagccaccaaccctctgaccagaggttctc
caaagaatatatcatttgctataccccaccataaaacccttttctgctgaacaatgaaat
agcatggatagcttaaaaagcagtacctaactgaaagggaataaattaaattaaagagaa
taaataccagcagcctgaagcctggggagctaggaggcattccatagaaaacctagggcg
gagagtggccagagtaaaaggaaagggacaatgctgaaagaaatgacaatatccagggag
cagagccagtttagttatagcagctaaataatttcaaactacaaaaggaattttaggctt
caaaactccagctcccaaatagtgttataattagtattattttcagattaaagaaaacac
cacttttgtgtaacaaattacctccattttaaatgcaaaaataatatatttcacttcata
aaaaatgcccaaacggaagcattcttacattaattatttcactctattcaaaaagcatat
ccctgcttgctttttattatgccttccagcttctactttgaaaaacatgttaagaagctg
gaaggtattttttaaaaatgaaaggaaaaaagaaaaataaataatcttggaagcaattag
agccaaaatacagaatgcataaatatacatgtacatattttttatttgccccctagattt
tactccccattttcttccacctccctttttggcaccagaatatgaagcatctttctttcc
ttgagcttcaacagcaggcaaatgtttgccccagaattgagtcagattctgttctgtgga
ttgattggcaagagttttcataaaggaggtggggtccccagagggcaaatacataatttt
cataatgcatttctttttttccccccagcctaggaacctaagtctatttctgaaccattt
cgtctaagagtaataattagcagcacattgcaaaagacaaaacaccatcgtcattgcttc
gtggggtctgtagttgctcttgtacaattaccgagaatataattttactgtgggaacaaa
gaacatatgtaaagtaaatattgttacagattttagactttcgagaagaaatttttatat
tcgaatattagagaaaaccacaggaaatggagtttaaaattgattctttctgcactttcc
ttcactcaattgactgtggctaaggtaaaagttgtcacttggtgacagcaaggaaagctt
tagcacaagcttttctaaacagggtatcaaagcacttgaatttaaaacatctaaaataat
gaagatattccccCCTCAAATGAACTTTGACATCCA
Primer
(+)AGAAAGAGGGAGGGAATGTCAG
(+)TGGATGTCAAAGTTCATTTGAGG


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