Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1209 ]


Position: chr2:59,894,793-59,896,957 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCCTAATTCTCTCATTTCTTTCCcatagttcctccaaggagtttgacgtggggtgggact
tatctcccagtataattgttatttttccaaataaatcttatagagttccattctgaatga
agtacaatactagagctaaacccacgaaactctatttcatggttttacttgcatatatat
gagtcccactctggaatccatgctgacaccaggaccaagcaaatgactccagaattggcc
caaagtagacccaagctgggtgttgatatttgcaatagccaagctggatgctgagcagcc
atcatttttcagctaattttctcctttcccctcctcccttgctccaggtagagcattatt
cattaagagtgctgcagagctcagtagagctcattctcgctgagatagcctctatgatct
tctgaagcctttaaaagggaatgagccttggcctcctttttatgggctacattatgacct
ggcttcaaagtgtgaaaagaggttccaagattccctttgtgcggtggagtctcttaattg
cacttttaaacacagtgtaatttttgtaattaacattatggtttcagagggcagagaagc
ccgcaccgtgctaattacaaacccacgtcttcagagttgcggaatttccaaggcctctga
tattggggcggaatacagtttttatgaaggatttcaaagatcctctgtgggctgtgttct
gagtcatcattagcatttgataacataaagaaattttacaacatgtgacagattttctat
gtgaagattttacctgataaccggaaaatttgcataaagagtttcattaggtctcctctc
acattactgaaagagtaagaagtatagtgcactctttccctaagattgttcttaggagcc
aaggaattggtgctttagaataaaatttacagtatattatgaagtgaagttgtaataatc
ttcaatgatgttgaaaatcagaggatacgtggcttttaagcagagggagagaatatgtat
cagaattactgagtaactgaaaaccttgcaggagaggtatattgtactattctgtgccat
ataaaagacatagtcctgctaggctgcagagtcaaggtgagagcttcatatatatataac
accaagcggcaataatgtgtaattttttcactctgtgaagagtctgttcactgaggaaaa
ttatcttcctcttattccagaggcaagtttatctttcctttacttttcaatccaagccat
caactgagtagtgtgtacacatgtgtgtaaagattctctcatgtgcacacacacgggtgc
acacactcacatatacacacacttccaaagctgcagtgtgcattctttgcagggtgatca
cagcttctgcaaagacggactggcctttcttaggctgataatgccagaaattgtactgtg
aggtaggaattgagtcccaaggccatccatttgctgaaatcctttcactgagcatggatc
aattaagccagtaatagtgataatttggggaaagctttctgtcatgatgggaacaagaat
tcatcattattccatgctgtcttattatttcaacaccatacatatgccgttggatgtata
gcagtagcttgcggcattatctcagtgggacgcatttcccttcatgagagagtcttttcc
ttggcgattatgcagataatgcatagctttgtaatgacatcacaaatagaatccaaagtc
ctaagaaacaattagggaagtatatcaatacttccttgtaatcataacatcatctgactt
ccagtgggatgccaagctggctccccaagttccataatcacgtagaagcattaatggctg
cttcacaatccatcttggagcctcacaaatcctggcagtggagacaaattaatatgcatt
ttagcccattgtcaacaatagaaatcacactggggttttgatcacagaacctagggtgag
atccaggcaaattaatctacgctgaaaaaagctggaccctctctatactgacctcaggca
aaatgaagactggactaaaaaaatacaaaagccaatattccctgaaagttaaacaccaac
gaatccttgcagacaattgtgacattttccgtttgcaaaactattTCTGCGAGTGGGCTT
TTAAT
Primer
(+)GCCTAATTCTCTCATTTCTTTCC
(+)ATTAAAAGCCCACTCGCAGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.