Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1205 ]


Position: chr20:21,488,551-21,490,021 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NKX2-4 - NKX2-2

Timepoints:
e11.5

Expression Pattern
hindbrain (rhombencephalon) (6 out of 8 embryos) 
midbrain (mesencephalon) (4 out of 8 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Embryo 6


Fasta sequence
TCTCGCGGTGAGTGGAAGggcggctccgcgcgcgggcgcttcggggccggtcggttgcga
aatcagggggtggattttcatctacccaggagccgctaagcccgtaggggaccgagcatc
acccaggccctgggtaccctgagttgcctcctgagccccaggacggtccgatggtgcaga
gctcccaggcagaagttagtttcctgatacacacacagcagtgagcaaagtgcgcacaag
tgagccaaaccctgaagacgcaggttcgcggactcccatcccagcgttagagtcaaggag
acagaagagaggaaggagagaagtgaggaagggagagagattatgagaaaaagagattat
gaaagtagagaaagagattatgagagcgagattatgagaagagagaaaaagagagatttt
gagagagagagacagaatgagagagatccaactttcagtgtcacggggcctaggcggggc
aagcgccctccgaagccatcaaagacaggggtggctttttctcccctcctccagcctcct
ccccaatagatatagcacgaatttttaatgcgtcttcctttcacagacaacaatacaggg
tttgaaagccggacacaatttaggttttgtgcgggtccctcctcgcgctccctcggccca
gctggccatatggaatccagcatggagcccgtggatgacaaagggacccagtgacaggcc
caacaaaaccccaaggagacttctgcctgactccgggattcactgccggcgataagcgcg
ctgaatggtgcggggtggggcggggggtggggggcgggccccttctccttcttcccctct
ctctgtccccgcgatcctttctctgtccctttttaatatgcacgcctctaacatctccgg
ctcccagctttcccattgtgcggttttgtaccgcccgctgtagattgggcgaagatagac
tgctgaagcggaccccgcgccgggtgcgctcccagggcgctggggttagggccacacagg
gctccgcaggcgcttttattgactccatggggacccgaggacagagagaggcgggcgccg
ggtccacctcccgggctcccggccggccacaggagcgcacacccagattgcaggcccgcg
gtcctggccacagctccaaatttgtcctcaatgagcaagtggtggaagcctgccagggtg
aggaccttccacgcttcccccttcctctctggaaacctgagggtctcttgtgatcattct
caccctggaagccctggggcctggaaaagtcaaaatggcctcaggccttctgacagctcc
gctccaagagacttgaaaccctcacctttcctcccaagaggattttgggattaggggaag
ttgcaagtggatgttgagtggttagtaccagggcaggttgggcgttcaattattgcacaa
caaactatttgGGAGAAATTCGTTGGCCTTT
Primer
(+)TCTCGCGGTGAGTGGAAG
(+)AAAGGCCAACGAATTTCTCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.