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Human element [ hs1204 ]


Position: chr2:59,896,819-59,898,978 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTGACCTCAGGCAAAATGAAGactggactaaaaaaatacaaaagccaatattccctgaa
agttaaacaccaacgaatccttgcagacaattgtgacattttccgtttgcaaaactattt
ctgcgagtgggcttttaatttttttccttgagttatttttcccatgcaatatttccttcc
agcctagcttaattctccttaaaaataaacatcctttttttttcatgggggaaaaggacc
actttctctaattggtttaaggcatgtcagtcacctcagcctgtaagggatgcaaaacca
tactctaagtggacttttaaaaccacatggtaggttttacaagttctcttctctcctgct
gaggggaaagcggtatgaggaggattcaatcatagctctggattccttttccaatattag
gaaaggaacaaaactcttctctcccaactcttgtagctcccaacaaacagaaatggaaat
tttagataaatgatcaaacttacctagtatatagcttttatttttacaaaatatttgctt
ccagcagagtgtatcttaattcacaaatgcagaaatctgtcattaagatctgacccagct
gcatggcattgtcaaatgcaataacgtatcttttaatagttttatatcaagtaaggatat
aacatatcattagtttaaatgtatttgcaagcaattacccccaccaggatatttgagaat
gctcatgcaaaattgatgaaattctgacatgcctaaacattgttcatttagctcaattcc
ttatgtatagaaaaaatagaataaataattctgctgccatttgcaaaccactgttcagca
tttttattccactcagggcttcagtgctgcctttaaagtacagcctttggtgatcatttg
aaaaaaaaaatagtttcatatatgtttaattttaaataatggactagatttttcattctc
cttattattgttcaatgtagtaatttaaatatggagtagatttactgcatgtcagctgcc
tttcttttacaaaatgggataaattattaaatgagtagaggttgtttgacaaccagtttt
ccagtactacacaaaagaaagacctttgccattcagctgtcttctaaaaagaataaagta
taaatcaattaagtcactatgctgtggttcagaaatgccatgctatggcacagttttcct
ttgcctctcaggtgactttcagatagtgtcaccctgacatttgcatggacagaatgatag
ctatgttgagatcctccagcgtctttcctgggtttctaaaaccttctttggctgaacgaa
gcatgccctaccaaaacatgagagacaaacaacagccaacaggttcctttctgatttttt
tttactgtactggtgaatgttatatactaatgattgattaatgttttttctgcttttgga
ttttgcatgcaatctttaatatgttcactgtgccaaagtagagaaatcttgtgatgaaca
tctcatcaccctttatgcaagccaggtgagaaattgcatttcaatgcctttctatgctat
tcctcaataccatattagcatctgtgtaattaataatacttcgagctctgtcaaaatgaa
atcacttttattctttccccaaagagtatcatttattaactatgtatgatccccaaatac
atttttctttactaatgtcactagtaactataccttttgaaatattaatccatctatcca
aagccataaagactagtcaaattattttaaacaaatctaatcactgtgaaaaacagttaa
actgattatttggagagtcatgtgataggtgcttttggaagactatttctgagtggagca
ctgctgcagggcatgcaaaaggaaggacagtaaaacaaatagataaaaggaaaggtaagg
tgtcttctctgaagaaaattcgagtctagttgaagagagaagactggttggttcatataa
caattatcgaggcacgaaactatatataattgagctaagtgtcagaatataattgtggta
gaatgttagagtaaggagacatcaataaaagctggaagtctgcatttagaaaagcttcat
ggatgatgggtctcatacaatgagtaagatttagatggATGGAAAGAGGGAGCAGATTCT
Primer
(+)ACTGACCTCAGGCAAAATGAAG
(+)AGAATCTGCTCCCTCTTTCCAT


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