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Human element [ hs1200 ]


Position: chr1:88,577,535-88,578,821 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100505768 - LOC101927891

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTGTCTGCAGGTCAGGTATTCAtaaatttcctggtttaatttcaatcttagctgggcaaa
caagcgtatgttttacaatggacccttcttgtcaacccttcaatgattagctcctttgta
gtttgctgatgatcaaatccaatgaatgccactcttgggttactcgtgagtcatctcttt
gagattccccatcctgctctacctgcgcccagcaagaaaacatcatttcttgtggtcagt
tatcatgagatcacttcttagggaaagaataagagaaaaacctacaattcttaataagtt
cattattagtgatgcagacacctggtcagctattgccatttaatgaccaagattcaaagt
ggcacaagcagacaactgacattttgccttagcatgcatctctggccagtgataattaac
ctgaaggtaaggaaccagtcattttcttaatacaacaaggcacctctttcaaagttgggg
ctcttcctgttttaataatcaaaaggaaaagacctttggtacttaatatttaaacaaaat
gtttaatatttacacagtaaagttcttcttctgatattaaaccagcattaaagcagggat
ggaaattggtttataatctctgacactaggcctggagccttgtagtgtagtaaacaatgt
cactcttcagatgggcaccacctgcattgggttcagaaatgtcaactgtaattaaacatt
ttatttcaaggataattcataggttatgtgcatgaaggactgctttctgccatgagaaat
ttcaaagtactggcctgtgtaaataagaagcaggtcttttttattgcatgtttttttaaa
aaaaaccatatgcaaactgtctgagacttaattaatattattcttaaatatatccttcat
atttttcaaaggattttaaagtcaattttatgaagcttgactggtaatgttgcatctcta
ccttaccaattgtttcctgaagctataagctctagttataagtaggaatactgtggggga
gaggggaagaatacgatttgccacatgctagcatggtaaactaatggcagagtgggattg
gttctcaccagccctacattttgcctttggggctttggtttttttaacttatgatttcaa
tgcaaacttgaaaatcatttataatttttaaaaagaacgacaagttattcataggtgtgg
gggtcacttagcacctctaataatgcttctgaacctaatgagaatttacaatgtaattat
tcaatTAAGCATGTGTGTTCGTGTGTG
Primer
(+)TTGTCTGCAGGTCAGGTATTCA
(+)CACACACGAACACACATGCTTA


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