Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs120 ]


Position: chrX:24,945,648-24,947,567 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SCARNA23 - ARX

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TAACTTGAATGCAGAGCGTGATAcatacagtagctatttcagctcagtattgtccttacc
aaatcacagtcggccactttggtacatgatgttctaactataaaggaagactgaaagaag
cctaggcactgtgttgagtgcaattttcaaggaaagagcaagaaatcgaacattttaaac
caataagtgaaagctggagagagaaagaaatgttaaaatatcatcttattttcttgaagt
attttccatccaatcttgtacagtcaaaatgagcatttaagtgtgaggaaaaaaacgctg
aagatctcagataagactagagagtgtcaggtttcttgattagaagaatttatcatcaaa
ggcaaaagagaaaagatggtaaagattttttaaaaaacaaaaaatctccaagggatcaca
aattagtggtgcaaaatcaagacaacaaaagtaggtgttattcttgttcatttaaactat
agttttctctgtttcatgtgtgttttttaaaaccacttaattgtatttgacattgaaaat
gtaatagggccttttgttttcaaccagtttactaattgcaaaatatgtcaggaatcaaaa
gggcaggaggtgttggtatatttttttaaaatatataactcctttttaattttttcccct
attttccttatccatttaggcagtgactttcaattagcctgcctactaatatcaggtcac
taaactccgtggctgacgctttattccttcatgtgggttgtcactcgtttgcttcagttg
gctggcaaaggttgttgtatatccattactagcaacacagcactttgcatttctgaattg
acaagcagctatattgacccagcgcttattatgggtcaacagctgcgttaaccaacggaa
ggactgaggggcaattaaaatgaattggcaaaaatatatcttcctaatttactccaattt
gttatttatgctaacattgtatggcttctatggtgacactaaacagaatggacccaataa
tggcaattaacataaaaatataatggctaatcaaattgacagcaactgtttctcatcatc
tcgacacacaatacattatcaaaacaaactattatgaaggaggtaatttcagtgttctat
tcaacctgcagcatgtgtgcagtcagggagatgtgtaccagcaattactgctgaatctaa
aaaactaaacaaataacttaatcgctgtcgtcctccttttttttcccccaggaagcagta
atcaggattcgctaaaaataactggtgtataatagtataatgatgatgcatattgtagaa
tagctaataagaaataaaataggcttctaggtgtatactttttaaagtaggttcaggtaa
agaaagagagacttgtggaaggaatgcgcccacaaaaaagacaatagccctgaccgataa
attgctccatgtgggtttgttcctgctaccgaatatttatagataccatttgtaatggcc
aaagaagtataaaatacactaaatttagtaacacattttataagggaatgagcagaaagg
tgaagtgtgagctctaataactgaattttagttactcctgcaccaaattgggttggctat
aatttttcatcattaagacccagctaggatccttggatctaatacttggttactcaaaga
gattccctttgaaaatagtgctatttccatatccagttgtagatagtggttttccttaat
ttcttatttacatgatagtctgtgtgtgccacctggccttgctgcatggattgtacaaat
gacttggctgttgtggtcattcataaattcattcattcaaccaacttggcacacagtggg
tgttcagtgttggttaaattacatgtcattccaaggcAGCAAGGGAGAAACTGGTAACAT
Primer
(+)TAACTTGAATGCAGAGCGTGATA
(+)ATGTTACCAGTTTCTCCCTTGCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.