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Human element [ hs1189 ]


Position: chr6:108,437,243-108,438,452 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: OSTM1 - NR2E1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCAAGGTCGGTCTGAAATTAcacatacacacacgaaagcctatagatactggtatgcag
aaaggggtggggtggaaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
gagagagagagagagagagagagaaagagacagagaaagagagagagagttattcccaga
acatgaggctctgtgtctcaaagtgcctttttcgaggcttccacctttaagactacctgg
atggggtgggggcctggtgttttaaaaattgtctttctatttctctggcccctttacaag
agcaaatttcttttaaacacttttaaatatctttattttccaccttttcaagccccaaca
gtaaggagtcttcccttgggattggggggcaatggagtcaggggctggctgggaggagtc
ccaaggctaattcttcttgttcgcctatttgcatccgctgttaggctgaggatcatttta
ataaataacaatgaacaggaatggcatctagagggcttgtcggcaacatttaaaagccaa
tagagtttataattctactctatcatttcttattgattagagtaatcaagataaaaagct
agccgggctcggagaacttcagcagcatatcattaaagataagagtcagttaattctgga
gctggggtaatgtggctgaaatgaagagttcatttgcatgagatgctgagcccagtaaca
aggggacaaaaatcactaattaggattgcagagtgtcggcctctcggcaagcaccgtttc
cagactgcggaccaagcggagattcgcattaatgtaaatctggggagcactaaaagctct
cactggctttgtagaaggcgacaatcactcccgccctctacgacgtcctccctggcccgg
gcagcccaactggggcggggacgggggttactcgggtcggatccccttttcttccctatc
tatcctacctccactcccgcggccacgcgaaggcgtctcacccacccccttaggggcacg
tgggcgaatgtctggtggccgggtgagtggaacccgccgcccagtccttgcagcgggctc
tggtctagtgggtgaggatccctggggaggtcccaactccggtgcagcgtccgcggggtg
aagggcgcgagtgcattcaggccccaagggaaactcggggacatctgcACAGACAAGAAT
CCCCAAGGAG
Primer
(+)CCCAAGGTCGGTCTGAAATTA
(+)CTCCTTGGGGATTCTTGTCTGT


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