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Mouse element [ mm1169 ]


Position: chrX:90,352,269-90,354,594 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm5941 - Arx

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGCAAGGAAGGTTTTATCAGGccatttagagatgtcatatagttccagggaaattcatat
aatttggtcttttctgagacccaaaccctatcttctcagaggaggctacaaatgttaatt
agaatatgtaattctatcctaggaaaaaataatagaaagcatgccactctcctacaggcc
agaataaaagactgtttcaacactcaatgtttctttgaacaaaataaacatttttatttt
acctttttcccttttcatttcttattttattcttttctttttactcttttatactaatct
attagaagaaatttgtgagctagaggtgggcaatgtattaatttctagaaagacaagaaa
agaagaaatgtcactaatcttacatctcacaaaagaagacagttatttagtatttgggaa
atattttatttattcattgctgactgtatataataaaaatgtcaaacaaaaaatagctta
attggcccaatccaggtctgtgaacaaagccatattcatcttgggggatggcagagcaat
ttccacaaaattcaattggagtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
atcttttactctttgtaactggaaggagaatactagttcactccatcttatagcagaata
tgtattataaccaaatgtggcttataaatacaaaagcaaaaaatgtgaaggttttttttt
ttttttttaaataaggggagccctggggttttgcctttggataagatatcaccagggaca
tttttttttacagtcggtaaaataactcaaatagcaagtgtcaaggtattgtatatccac
ccagttggtaaaataagtcagttaatttggcaggtaagcattaagtaatcacgctgtcag
aatcgggtgagtatctaagggagaaagacaaagactgaacaaaggaggaaaaataaaata
agtagcagattatcaaacaagtaaataaaaatgtgagcttctcaatgctctattgtatcc
ttcataaaccaatgcaaccccgcaggacttttttctccctcttgggagtctggacagcaa
agtggggtgaggaaaccacagcccgactgcttgtgaactgtgctgttgagaggtgttttc
gaaggtttctgagaagaaaggcccggtccctttaagaattaaaatctggtctctggcaag
cacagagttacagaatagcaaagaagcctggttctccatacattagcttttccccctgaa
ggagggagctgaattagaagcatagctgccaggaaaagtctgaatagagaccatttaagc
aggtttttattcagggccagggaaattcacataacttggccttttcctcacttctcaaaa
cagaatatgtatgtgtaaatgcactgaaacctcccccagtctgggagacaaggatggggc
cttatttgtctttgaacaccagtgatttgcacaggcctgggcacataataggccctccaa
agcatgtttgtgctaacaaaagagaaaataatgtctttagacctatccacttgcagttgc
ttcccttttcagataaaaaaaatttttttcaagctacttctaaaattaaactcagagtcc
ttttcataaaaatatacagaggagtcagagtaatatacagaaatggactgccaagagtaa
tatcttgcaagcccttgtctgactgataaggaaacaaaggcatacagaagttcactagtt
tggctaaggtaacctaactaactgctggtggtggagtttatagcagtggctctcagcctt
cctaatgctgggagcattaacacagttcctcaggttgtgctgacccccaaccataaaatt
gttttcattgctacttcataactataatttgctactgttagaattataatgtaaatatct
ggtatgcagaatatctgacatgagaccccaaaggggtcacaacccacagattgagaacca
ctggcttagaataacttagatctcttacattcctatgtcccatcaagtagaactggaatt
ggtctagatctatacatgggttttttaaactccaaaaccacatatgtatgtaaaaatatg
tatgtaaaaatctatgcacattggatgttttggagaaacagttcaaagtcattgcttgat
ctttttttcttcagtgttatatagattgaatgctaggtctccacctatgagacatatgct
ctgccactgagtcacatccacagccctgtcccttgatttccagaagatatgtaacctctg
aaactaacaacaatatgaactaaGCAGTACCCTGGAGCTCTTGtct
Primer
(+)GGCAAGGAAGGTTTTATCAGG
(+)cacCAAGAGCTCCAGGGTACTGC


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