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Mouse element [ mm1168 ]


Position: chrX:90,313,173-90,316,088 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm5941 - Arx

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACCTTAAAACTTGTTTGGTTTTGGttttttccccctatgggaagccaagaatttgaggg
acttaactgaagttttttgcatacttgaaaaagatgttttccagttaaaaattcaaagaa
acaatgggaggcaaaaaaaaaaaaaaacaaaaccagtgatgccttctgatttcatcccaa
gattctagtctattcaatggtctattcgatgtacacatttgtggaaattacatgggtcaa
gaattgggctaaattttttatacataagtatatttttacaaccctataatacattctgtc
atcatactcattttataattaaagtaactaaaatccagagacataagtaacttaactaag
atcaccacacttctattaatgtcaaattcagaactgtttgactccacaactcatgctttt
gactgttgccatagtaacttattggtaaacactttggtataaaaggaacaattcttagat
tatgaggtttagattaccatacaatcactaacctgaatatattgcacatatctgaggggg
ggggattccaaaatacagtctttaaaatcaaaatggcaagaaaaacacttaagtttttat
tactcagggctcacagcagctaaaaggtttcagcaatattatatggcatacaaattgcag
atttaacttggttgaggagcgtccccatgcaatcaccataatattttattgtagaataac
agcacaggtcctgatccctagcccttggtaaacatgagtagctggaatccattgttgcaa
aagcttaacatcccccacgcatggcatggcctcgacctgaaagcgagttttctatagcct
aacatcaatagaaacttctctgctgtagattagacttttatgaattgggattaacagaat
gagcatacagtgaccatccttattagggaatgctttaatcaactaaagctgactgaagga
gaaaaagagttctcaaaacagaccagctgtatgactctgctaattgtgacttaatcccaa
tttataaaagcacctgtgttacttgtcattcgtcttgttcctgccaactataccagacaa
taaggacctctgtgccgtgaggcagcaggagaaggtaaaactttgtatgtcagtatctac
agggattagaatgatatagtttcattttcactctggtcattttgaatattcctttccgga
aatggaattctacagcaccatctaccacctccgctcctcacagctcgcttaactcagccc
agcacacagggctacattttgttcctctgccttgcctgaaatggatgcttctttcttcat
tgtttggaagaaagaaattggaagtgccttctaccgagaggctcttaacagattgtggga
cttctggtttcttttctgagacacatgaaaatgtaaatcatctttccttctacaggcaag
gcagcgtgaccctggagcatacaatcaactgccctccccttcacgggcctcaccagccca
ctctccctcctctttcactgtgattcgttctctctctctctctctctctctctctctctt
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctccaccacccccagagccctggagcttgaaggcaacagccaaactct
tttatattttgaaagtaagaattgaaagcttgtctgagttcaaagaatcacttggtacta
aaaggatatttttatgcattccacagtggaacaaatattaaaagatataccaaaaagaaa
aaaaaaagaaaaagaaaaaggaacctggactcagccaaaggagcagaatctgaacattca
tgttgtgtctccaggaactgccaaattctttgcctttctctcaggaccgctctgtggagc
tttgagtgacaggcagtatggcacaagccacgatttaaattctgcttgcctcattctttg
catagacagcaacgggctgatagaatgcaactaaaaacataattcagatgggaaaataca
acatgattttcacagaaagagaggaagagcacagagacatggcttaatatagccagcaga
gggcgcggcttacacatgtaagtataaacaaaccgtccctcgaagctgtaaggagctcct
gcggtttttgttacagattttgcgtttttcgagtaaaccacgtccaagctccctttaaca
aaactctagtattgtcacatagttctcgcctcatgattaaataagactatgtctacagcc
ccttcggtcactcaaactgccactcttctgccccctgctctggcatgggaaaaaaagtgg
agatacactccctcaaaggacagcttcccagaaagagtgacctgtattcccaagcagcct
tcatttgtttaagagacttgcacctagaatttcttgatcaaagctaatgtgctgtaaatt
tcttcatttaacagacttagtctgttcaactcttgacactgggaattgggatttcccaga
actattagcactgcacagtaggcattccatgccagccaagaaccggggattaacaggtat
ttgtctcagctaatttcactctctataccggctctatagagactagagcttcttggcgga
gtgtgtgccaccctgctaattggctacgaatgtaactactcccgaatgccaatggagctg
ggcctgaagaggctagaggcaaaagatccttatgatagacatacatttgaggctggttga
tggcacagtaaatgtagatggttcctttgccaacctctacctcttgctgactatcaaatg
cccatcccgatagatcatggggtgatgtttttgtttttttttttaatgcacattcatata
catacaatcagtgaCAGTTGAATCCTCAAAATCCTG
Primer
(+)caCCTTAAAACTTGTTTGGTTTTGG
(+)CAGGATTTTGAGGATTCAACTG


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