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Human element [ hs1162 ]


Position: chr5:91,828,131-91,829,295 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ARRDC3-AS1 - NR2F1-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCTGGGAGTTATGTGTGCTCAAtttctatagatcctggagtgaactaagaacagagtggc
agacttaatttagaaatctcctatttttttgatacttaagtcaaatccttagctctattc
taacacagagttttatatttacagatgccctcattaacccttttgctgtcaagacagata
ccttctggttctattagtccccaccagactaaattacttgcatcaggtctctattacgcc
tccacttgagctagcactgtgtagcaaaacaacactggtagggagtgaatggttatcaag
agaaagtttactttcagtgttaagaattaatttagctgaattggtgcagtgaaaggggta
aacacaatcccctcactgttgtttgtcagggtgtgttatatcacccaggattgctatgtc
aataatctgcctggcctgcaagctaaaaatctaagattgcttggatgactgacaggctgg
agatagctgataattctaaggaattggaggtgtaaaatctttaaggaccacgtctacagt
ataaatgccagggtatctccacatcactctgtacttacaaaggcaacagcattgttaatg
gcagcctgtctgtccatcaagtttgctaccagcggatttatccctctttcactccttatc
tttctttgctgtgtttatttcgaaaccagctgcagaataaattgcctcttgtcttcacct
cctacactgagtacaatgatatgttctgtaaagcttaaaatcatggtgtttttcaagcac
tccttttttcagaacactgacttctaattttgtttgtttatgaatatgtattatttatct
tgtgggggcttttacaatactaaaaatgactcttatttacttggtgaatgctcaggatct
agataaagatatgtgtgtgatatttcacagagaaaaaataaatagaagtaattaatataa
tcattttgttattgttttgaataattaattagatctgatctgttttaatcaaatagttaa
aattaaaaggcagccaatttcagagcaaatagcacacttctattaattgacttcaggaat
ttagtgaagtttaaatatctctcctttatgcacatctgcccagtttcacttttctaattt
aTGACCAAAGGAAAGAAGACAATTG
Primer
(+)TCTGGGAGTTATGTGTGCTCAA
(+)CAATTGTCTTCTTTCCTTTGGTCA


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