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Human element [ hs1160 ]


Position: chr3:71,253,670-71,255,013 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGACTGCAACAATGGAGACATcacatttgctagcatgagggccatgcttttacactgct
cacccgtcacctggcgagatgctgctggagcaggtggcaatgaggagatgaggcactgac
tggtggaggggatgacaaatgagacttagtggttaaggaagcagacagaaagatggcagc
cccaagatgtagagttactgtctacaaatgggcttggatgggctactcttaagaaaaaaa
caaaaagggtagatgggaggagaaagaacaaaacaagagaaacagagttagatcagacaa
ttgttttctcacctgagataacttctacaaattatgaatgaaccctacagacacaccatt
tgtctatccactgtcctcctgacccgggtcccatttcatggaaagactacccaagagcca
agtttaggaggcaaagtcagtgtgctgactgtgttatgaaggcaccgtcttccaatacca
cattttcataattataacagaaaggcgtaaattttctaaagcatggcagttcaaaaagta
atcaagggaatgagccggagggctattttaatgtatgcaaagctagtgacccacagtaaa
tgggaggtaagctacaatgaatgcaaagtaatgcacacatactacagtcctggtctgata
agggacggctaaaattaacacccaattaatttccgaattgacaaacaaatgaaacccata
aatctactttctcattaattttcttgtggtataatttaaagcagtaatatgagggccaaa
actgaacattatccatcataaatatcagaaggatagcactgtaacaccataaattatgca
tattacctgttgttaaaaatgatttatgtattatcaactttatcatgcaccatagatgtc
tatctacatgtatctttaaaaatctggaatttcatttagcccctctggaaaaaaagttca
ggagcaatgaaattgtcaaaagcatgttttaaaaaaaaacaaaaccaaaacaaatgtggc
cactcatttagccatacaggaggatcaggtaaaactggaatcattccaggtctcaggtga
gtagaggctaagaacccatggaagtgaggagtcgggcctccccagggaggagaaacaaac
cagctgtaggggcacccctcctagagaacacagcatctgtgtccaaacggcgccactgac
ctgtcctgccctctggaacgcaggaggtgcagggcttggtacacgtaagcaaaggcaaga
tgcatttgaatgcatctgacatggccagtggggatcatctatagctatgatgaccaacgc
aaGCAAGGAACACTAAATTGGCAA
Primer
(+)AGGACTGCAACAATGGAGACAT
(+)TTGCCAATTTAGTGTTCCTTGC


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