Human element [ hs1151 ]
Position: chr14:53,833,457-53,836,210 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
LOC101927620
-
MIR5580
Timepoints:
e11.5
e14.5
Embryos 9-12 were collected at e14.5.
At e14.5 (but not at e11.5) this enhancer shows reproducible activity in several craniofacial structures.
Expression Pattern
| heart (3 out of 8 embryos) | | limb (8 out of 8 embryos) |
Embryo 1
|
| Embryo 2
|
| Embryo 3
|
| Embryo 4
|
| Embryo 5
|
| Embryo 6
|
| Embryo 7
|
| Embryo 8
|
| Embryo 9
|
| Embryo 10
|
| Embryo 11
|
| Embryo 12
|
|
Fasta sequence
CATCTGGAGAGATCTTGGGCTAgatgcccccagtctaactgagacgctgactttggaggg
ttgttccagccttgcaatagtagtacctttttgtttaggtgggagtggattagaacagtg
ggtaaagttttggggtgaaagaagccaactgggacatatgtcttagggggacacaggctt
tgtccatcctttctctaaaagtactgggctgaaccctctcagcagagagttgtggaaaat
tagagacgttctgtggaaagaccaagttaatgttcaagtctcagaatctgatcttaggtc
aaatatctcttgcttttgccagtaaaaagagcccagatgtttttctatttacttaggcaa
acccttgaaacacaagttagtcatataaaactttacatttgcaatgttaagagcccatat
ttggaaagtcacaagcataaaatatatactgtgaaatgggaggtcaggacggtgaactca
tttcagaaccatagttttgactcaagaattttgatggggtcttcacgttggttgagcttc
ttggtcctaatatcattgagagaattaaatcatgatattaaaacattgaaacactaatgc
tttgtttttattggcaagaaccaaaatgatctaatactaatgccacgaaacatcagtcac
ttttttcctgatgaataagatgaactttggctgcttatgatagtaaatttaataatgtca
gtgatttgaactgtttcagttctaaatgtgcagaaatgtgttttactgcatctctctctc
tctctctctctctcacacacacacacacacacacacacacacactacttctgtcaggaag
ttttgtggcaaatgagcccaaatgcatagattagagcatatcattcacatgtgccatgtg
tgtgccaaagtgtgcgtacccactgctagacttcctctcacaggtggtctgaatttgctt
ctagctggtcctgtaagcagatttaatatttcataagcactgctccatctcatgcctcca
ttattgacaccacatggaagtcaggaaattggttctttctgggaacagtttgcagaaata
tgcagcctgtcagcccctttctcatgggtgcattaacagagcagctcacgattacaagta
acgaaccttctccagatgtgtgtagcaactcagctccaactttatcttcggccctgaaga
tggacttggcaagatggattatttgtggctgtattgtaataactttgtgaaattggaatt
cccagtgattgtaatggagggtgaggaagcggcagcagaggaacagataatttctccttg
cagtaaacaacgaaaagaccaacaacaataaaaagggcaaatcagctgtggcattttcct
gctttggacaccgactcttccagactgttctaattctttcccttttatgattctgtttat
gttacacacattaaagttaagtcatgtcttaaataagatggaaactggaagtgagatttg
gaaatgactgaatcaggcttcttaacttttttcttctcttggagagctcaaaaacaacgg
acagaaagggatataccaaagaaaacaatattaattgtcggcttccatggaaaattcaat
ccagtctttcattcattctcttcccagtgcagtgccagcagacttctctctatatggcta
agggcttaatttagctgacaaatttctgaaggataactaagctttcagaaagaaagattc
tagctataaatgaagcatgtgtgctctctcagtcacaaaagacagatttttccaggataa
agtaatttggggtaaatttctcctgtattttattagcagtgatgatttcaagggagtatt
cttttaaagcaaggcagtatttaaatctttcttttaaatcacaagtcccttgagttgata
gttataaaactgggttccactgggagttatttgtacatcttcaaggttggcacccttagt
tgtttgatgtagatgttctagataaaattcctaaagtccagctgttatgatttagcttaa
tatgtttgtacagaggggtttcctttgtcattgaagagatagagtcaaaacagaattagt
cattcttgcatcttctatttatagcccactattattctgatgcattgtcaaagaatgaag
tggacaagaatttttcttcctttctttcttttttttgtgtaaacaaaactctttttatac
tctgtggatttaactttggttgctaacttagtcagacaaggcacttaacaaaaatattac
ttcttaaatgaaaaattacctattaagtcatcccatcttcatttgcaaattaaaggtttg
tcagtacaaagtatgtgggatgaccagaagtcatggatgacttacactgaagtggcaagg
gtagaaaaggtcagtttgaaaatttatttgtatgggttgctcatgactaatagtccaaat
ctggagagtttataaacaaaattctattctgtttatttagtttatgccagcattaaagct
agcctgaaaatttagtgaaagtcatttaaggaatttttatttggaggaaactttaatttt
tatttttgaggtcactgaataaatgtagaggtctctgtggcctgtactgcaacaagtaga
acagttagataaactggttgttgaaactccctgggccactgagttttcttatttcttttt
tttttttttttagtagagagctgactttagagGGATCAAGAATAGCTTGCTGGA
Primer
(+)CATCTGGAGAGATCTTGGGCTA |
(+)TCCAGCAAGCTATTCTTGATCC |
|
