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Human element [ hs1145 ]


Position: chr6:41,436,815-41,438,024 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NCR2 - FOXP4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGTTGCAGGGTAAGGGAGAAAGgaataaagaaaaagtgggaggttatggagaagaaacct
aggcctgcgcaggaaaacaaatggtctttcttagatgctgaagccctaggtgccaacaca
gtgcttttttctgtagggatccaggtggagggtggacaagtggcagccctgtcctcatct
ctgcctccacacaagggtggcaggccctgcctcttccccaacctgggagtgatggaaggc
cacagacccagcccctccgctccccagcctgactgctggattcataacatttccgacatg
agcagtcttcagaggtgctgtctgaagccaccgggaaacaaacttggcggcccccccact
accccaccccagagacccccaaggagaagctgtctctaggaaagggggtgggggggaaag
cagagagacaaagtgattcttaaacattttccttctctgcagtcactcagggaggagggg
gtgaggggtgagggaggctggaaggggggccaaagggggcttaataggctccggtgacag
cacagtgtccacattgggaaaagattaatgacgaaaattaatcgcctgacctttctttcc
aggagctggaggtgaggcgggccattaaagcctcttatgttgtaattaacgttggagggg
agaagagagctgccttcagaatggatgtgatcatttaattaggcttaggcgtaggtgcca
caacaggtccggagaagtcataatttaactacagctttaaattacacaggcagagtgggg
atggcagagtttgacggcaggagagcctgcctcggagctcggggaaacaattagataaac
atcccgagtgagtgagagagccggtcagagacagacagacagacaaagcggtaggcgctg
acagtgagaaaggtggggaagaggcaaggaagggggtggtgcgaagggcggcgaagaggg
gcaaccgtaggagtccctgagcgagaagaaaagtgagatccccaagagtgagcggcggcc
tgaggaagaggggtgtgtgtgtgtgtgtgtgcgcgcgcgcgcgcgcgcgtgtgtgtgtgt
gtgagcgcgcgcacgtttctggggcgagtgcctctgggcaccctcaacagccccagccgg
aggtgcagactgcattcttcaaacattcttcaaacacacccgaccttcCAGAACGTGCAA
AGACACTGAG
Primer
(+)AGTTGCAGGGTAAGGGAGAAAG
(+)CTCAGTGTCTTTGCACGTTCTG


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