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Human element [ hs1129 ]


Position: chr15:37,216,993-37,219,601 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MEIS2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAAAGAAGTGGGGTGTCTCCgcagcaagtgtgacaaccagaaatatttctaatcaatctc
tcttgcaaacggagatacagttatggattgatcatcaccttccttaatttcctctcaggc
tcccaccttcaccccatcctcccttctggagtaggtgagtctgatgccagaactggtggc
ctgaactacttcttcctgcgcatcagcactgcaagaccgcccgggcagcacactcacctc
gggacgccttgcagggatgcagtgactgtctggcactgtttcttgtatccctcaaggctg
tctcccaagttctttgtaagggcagccctagctcaaaaaaacaaaaacaaaaacaaaaca
ggaacagaaagaaaaagagaaaaagaaaagtaaaaaaggagaaaaaaagagaaagtccta
tcaaatgatgagctcaattccagccttgctaggtgcacttgactcccagcctcaggcaga
tgagggctccgcctgagtgtttattatacatgggcaacgtccttacgaagagataaagta
acagagaaggctttcatgaagatggaggggcgcaccctgtgaatcaagaagttgctaatt
atttaaggattggcaagttgaatttcctcaaagtgatgcacgtttatggctcagagacca
cacaagggtgaggcggctgctttgtttggatattttttcatttttttttattgaatttca
taaataccaaccaaattcaaacaaaactgatttagatttcacctcgtcacttaaaatata
ttttgtcgagtacagtctgtgcagtaatcctctgctatactttaatttggttttaatttt
ataggccctgttttaactgcatatttccagacctttatttctctcacagctcttagcaaa
atggtagctcataaacacaagctctgctgtatagactttgcatttcatcccaaagtattt
ccttttttatagccgtggtctttccatcttagtgctgtgagcttgggtcacaaatctctc
tgctattccagtgtgtgacatcttcgctcgtttgccgctgctcattaacaaacaatactg
ctgtgaaattggtttaatgacaaagtaataaaattgctattctgctcacagattgcctga
ggcactttgagctcctacaaggcttactgtgggtgccaagatacattaagctgcttattc
gtaaaaactgcatcatccgttttttcacaggttttttccctttcctatccagccccgctt
ctttttatcttcaaataaaaagatatatttgcttatgttcttccaggctgtcaaattttt
acttgcatgcatatttctggaaaatgaaagtatatttcatttcctttttttttttttctt
gaaaggtcactctgtccctactacaaggttgtccctggacagaacacctactgcatacaa
cattaaagcagacttatttttgtacattatgtaagtcagagccagggtcgttggaaccta
ttttgggagagcaagggaatgaaactatttatggaatggttttaccttttcaaaaaaaca
aggtttggagaatccttacaatttctctcttcacattaaaactgaaaattttagatgaaa
acaacccacacgactctggtggtgactattcacattaatattttatgaataataaaatac
gtctgcattaaagcaaaaatcttcagcaggcacctgttttccataatgaattacatgttc
tgggaaagtagcctttttccatttgtctaatgcccatccagacctgaagatttactgctg
caagacaatggggaaataacccaattgcggtttgacaggtgggcaggtcttgataattat
ggccagacatcttaacactgtgcaactgatgtaaataaacatccaaagcacagatcaata
ttgctttcctacttttgcattttgaacaacacatgctagcaatttacatcctttctctct
ttctggctgattggaaaggctgcattcatttaaacacattgcatgcgtgcacacactcca
catatttcatttaaaagtattcaatacaccccaacagccaggactgtactttataatcac
attatagtcacctgctggtatatttctattaattatgtaaacggatatctcaagagctcc
aaaaagcatctgaattggccatttgaatacctgcaatacctggatgataaatttaaggga
aacacgaaccaggttggcaaaaatacaaactgtccagaatttgggcatcttttcttccta
ccgatgtgcttggcattctttacaatttcatgaactgtaggtgcttcctcttctacatgc
atctgacctcataaatctcagcaactggagattttattacagcagccaaaagatttgcaa
ggcctgccaatcctgctgagaggctagcccccctgaagatgagagagggtctgatgagtg
atgatgggggggtctgatgtaagggagcatataaaccaggggtacagaaataagtggcct
gaggaagcaaggtgaactgtttccacagagaggatctgagggaggcaggtagagaacctg
gaaaaaaggCAAGAATGGGCAGAAGGAAA
Primer
(+)CAAAGAAGTGGGGTGTCTCC
(+)TTTCCTTCTGCCCATTCTTG


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