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Mouse element [ mm1116 ]


Position: chr10:20,960,334-20,962,688 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Myb - Hbs1l

Timepoints:
e11.5

Data from E14.5.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGTTTGGGATGGGGTTAGAGcatcagaagttaaaagacaaaaacaagagacatagtgtgc
acatctgtaatcccggaggcagaggcacaaggaccacagcttggactatacatgaattca
agagcatcaggcctatgaaatgagaccctgccttaaagacaaccaaaggctgtgggtgta
tctcagtgctagagagctggcttagcatgctcacagctttgggtttgatccccagccctt
gggggaagagggagagtgttgaaacctgactgtgtttacaacaatcacagggtaagcacc
ccagaacaagggtaaagttctagactaagagtgaagacgttcacaaacagacatgacaga
agaggagggtaaaagtcataataacttgttatagagaacaacacattgatccttccttac
tgtgacccttgtttgttttaaaatattgtagctttcctaattgacgaacgccactttgca
gtggtacaggtcatgtaggaatctctacttatgaagatttctgaggaaaatgttgaagaa
gaaggcagatcacagaacaacccttccacacactgaaacaaatgtgtctttgaactgtaa
aatttcttgcttattggtaataagcaagggagtacagagtgttgtaaaaccctttgttga
atcccagcacttgggaggcagaggcaggcagatttctgagttcaaagccagcctggtcta
cagagtgaattccaggacagccagggctatctagacagagacaccctgacttgaaaaaaa
caaaaaaaacaaaacaaaacaaaacaaaacaaaacaaaagccctttgttgacctttgttg
accatctcttcttactatgtggattaaaaaccaataagaaatgcaacagctggtgagaga
cttttttttagcaagaatatttgctgttacaagacaaatcatgactataaacagcccgag
gaaaaaatctgaacatgtgattacacttgtagaatttaccccaagactcttaactatatt
tttataggagtccttatagcaatattgttgacaatagtgaaaaagtcacaaacagccatg
tgtttagtgaagtaaactcatgtatacctatagaaaagcattctgcgcagcctttgaggc
tcacaggcctaagaatgtctgcttttatcccagttcttgggaggcagaggcagacatttc
tagacaagtctgggtgcatcttcatctgcaatgtacactctgcatagtgaggccctggcc
agctagggatgcacaccaagactccacttctgggcacttttatttagttctttttacact
ttgtattctctccatttttttagcaaaaacttccccaagtgagagaaatgttgaaatttt
gataatacatgtcagaaggttttgccagtaagtgtcttcagagggaaccgccctgataac
attttgtggttttgatataggcacatctgctttccagggtgaatataatcctgatgccct
gtcaggggcgtccttaatcagaaacaccaaattgctttgttcgcctgcaacactgcagaa
atgagtttcacaaccaccttccaaacagaactgtgaaagcggtactcgctggagtgtgct
gaagctattggagagcatggagttacttaatttactccagttatgccagagaacaacagt
ggatgggctggcttagagatctgaagactgaggttccggctccgtttgttccctcagcta
caggtgtgctttggagctaatgagaatcataatcataattaccagtgttgttattaacca
tgtgatgaccatgcactgctttctctggtgctttattatctatagcccccataacttctt
ttctcaggctattaaacaccccatttcattgatgaagaaactgaggctcagggagcctgc
taacttctccaagctgttaactcctaagctgtacagcgaggcgtaatgatctttctggtt
tatttagttcactgaggttcggaccatccccagcaaacacaagttaaaggcttcagttta
ttttggaggcagtggcttactggtttggcttacagtccatggctgccatgaacctgtgca
tcaaacctttattctgctgcctgcagtgtgctatgtttattattgcaatttagaaatgta
aaaatccaaaagtctgggcccagaccctacctccgcatgtactaactgttgggacattgg
ctttaatttttctgggttcctgactctttatctgtacaatggaaccagaacaatgcttaa
gtcaaaacatattagggggctttaggagaactgtccgtaacgtgtttaaagcAGCATTCG
GCACGTTAAAAGcat
Primer
(+)TGTTTGGGATGGGGTTAGAG
(+)caccttttaacgtgccgaatgct


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