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Mouse element [ mm1115 ]


Position: chr2:159,306,446-159,308,439 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Dhx35 - 4933416E03Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATTACCCCAAGGAGTAAAGCccgttcatgtctcgcccaagactgatctgtatggaatctt
atttcatggtggacgcagcgatactaggtcttcgttttaacagactttttgttttgtcaa
taccaggttcaacaaaaggctctatttgtactgtgctcaggttgtttagcaaggacaagc
cttgtggagggatgggataggctacgcggcatcagtgactttcctaggatatcaaggagt
catgacattaaccggttcaggaagacaggtgagcagttaggccttagaagtagatgggag
tttgaggtaaaggaaaacatgggtaagaattttccttcacaaccgtgtatgtgcacaatt
ctatataaaatagtagcttcccagtaaacaggaagttatcggagtccttcttagctgggt
atccattgtcccagtatttgatatgtctgaggatgttagtggataccaacaactgtacta
aggaagaactgaacaagcagaattgtatacctcttcctgtagcaacatgacctaaggtag
agatatcatctccttgacagcctagtttataagttagcccaaggctaatggtctctgcca
acaaccattgacctctacgcccaaggcttttttgacactgggagcctaagttctgccatc
tatactcaccgctcttcactgttaacttatctgatggggctgttctcttgcaaagctgtg
ttattcttgtaatgcaaagtgacagggaaaataaaaacacccagctgagaaaaagccaca
acgttaatgtgaaacacaaactttctgttcatctgaatcttagtttattttaaaacagaa
ccataacggctcagatcctggtgactgggaggggctgttgctacagctgccctgttctca
gatccttccccagcatgccttctggtcttaatccttagcacttttcccaggagccaaggt
ggtatgatgtgggtttgccctccctgaatatggcttgaagaccaagggaagagcaaattc
ttcaatttacagtagatcagtgcgaaacgaatgtcacagtgtcctccccaccaaccctga
agtccctcggactgcataaaagcttggccagagttctgcaggagctttgttctggatgaa
tatggcttttgtgtttcatctgaaccaagtttggggtctgatcccaaactctcacagctg
gcacggagcaacatctggttggcatcttctatatcctgtgtttcctggtgtttgcctgca
tttttgggaattagctcagctttcttatttttctgaatgttttctgaacagtattagcca
tataagaatgtttgccatataaagccccagggagaaccctgctatgtaggctgtttcctg
tcctcattccaccccaaaactggaaaaacaagagcccaaggaggaaaatagaaagaaaca
gtccaaataatagaagaaaagcaggaatgctcccagatgacagggcttaatgaatcatgg
gaggtaaacaatgtcaaattatacctctctaagaagacagttcaagaaagtgtccaccag
gttaaagattggtgacttgcattcagtggggcatgataatggtcaacttgagaagttcat
gggattgaaacagaaacactgactgctaagtggctttggcattgattagtattttgcaac
caaggtccacaaaacaatctctcccagagaacactcacaaagtgtgtctgcccaaagatg
tagcctcagttatattttatatatgtttaaggaaagtattccatttgttttacttcattt
ttaagacaaactgcttacttgaactatatgtaaatgaagtttaagtaggtgcggacgagt
gagatactgaatgcatagcaggaactgtgtggtaggaatgtacagactgacaagggagta
gaagtcaggatctaaagccaggtaggtgaaccaagagaccacatgccaagaaatGGTGTC
ATCTGACGATTTCT
Primer
(+)ATTACCCCAAGGAGTAAAGC
(+)AGAAATCGTCAGATGACACC


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