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Human element [ hs1113 ]


Position: chr2:58,948,607-58,950,015 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01122(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCAAACTTAATCAGCACTCTGTCatcactagtcaaaacacgacagtgatgacatcatca
tggcatgaacaataataggagggccattcaaaattggtagctttgctgagcttgaaagtt
attacctctcacaaggaagtgtgaatatttgtacatgaaattattttctaatgtaatata
agattactaggttacagtttgcaataaaccattaataggacttggggaagatctaatcag
tagttaggctttgctttacaatttttaactcaattgtgactgaattttgcttttatttaa
tagctttcctagttacattttgattagctgtatatatattttttcttcttttggttctcc
tagctattaggagtgaatatctgggaacatgaattccctttctgctgaaacacgaaccta
ccaataaagagttaattaaattggcattggcaagatgttttctcccaccattaattgttc
tctgcttactttgatgttcaagtattgtactgttttataagcatattttcttaattgtgt
caccttgtactataagtatgtcagaggggaaacatttgcaagtgattagatatggaccta
tgtgtcaccaaatgtatgaggtacatacccttataggatataattgtgatcttttaatat
gtggccattgacccagacttgttattatctattatagtttataataatgtatctctttat
gattaaatgatgatgcccggcagaacactatgattagcatttcagttatttatagattat
gtcagagcagtaataaacataaaatgctgttaatgtgtggctaatgaaatctggacatga
acaagtttatgaattgatataattcatttgagtgttctaactgagctgctggttcttgtc
ataattcaaaagcttagcagcgttcaccgattagatggtagactaatttgctacaaaaag
tcaatgggctttcatcgtcttgggccatcatgcccagcatggctgattgcataaggacta
tacaaagtaattctcataagtatatttattatgcttaatatgtttggtgaggataggaca
gaatctactattacacaacatatgtagaacaaaaatcacagtgttaattagatagccaaa
aagatatgtacagcaaaatcatgaaaggctagagaattatttgattattacaggagggaa
aaactgggatgattcaggagcaaatgctgatgacagctgcaaaatgagggtgtctccttt
ttttctcttgagatattcattaagtatatattaaattctgtttgactagtaatgactgga
agctgcaagttgcatatttcaggttgtttgtacaagctccatgtctatagctaagttcga
gtctccaagGAAGGCTGGCAGTTTGTGTT
Primer
(+)TCCAAACTTAATCAGCACTCTGTC
(+)AACACAAACTGCCAGCCTTC


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