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Human element [ hs1111 ]


Position: chr2:60,516,097-60,518,092 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTGCATGGTTTTTGTGCATCccatggaaaaccctgccctggtctcctgacatccgtgagc
tccctgaagggggacaaaagcagaaagctcaagtcaggtgaaaagattgccattgaggat
tggaagaggagtggccgaaaaaaaaatggaattggtccagaagacacacacaaaaataaa
taaataaataaaataaagagggagtgttgcagagctctttaaaaggctcacatgccctgc
gagaaaccttcaaaggcgagaagaatgagctaacccttcagaccctttgaaatacttata
taaatggtggaatccctgggtccactccttcttcaaatcctgccgagttaaggacccccc
acccccaccaccccccctcccaactacatgctttaggcagtgtgtacctggaaagccaag
tgccgaggcattgcagagaatttctctcactatttcataaggaatgcttagaatattcag
gctgagaagtatttcttaatttcctgtgcaatctgaaagcattatccaagggttattttt
gttttgttttattcagaagtggggttgctggagcattcctcttggacatgttcagatttg
aattaattagaattcctgtacagttttcttcggttataattatagcttaatttgattgct
taatggctctggttttcgtaatgtttagcacctgttgtaaattgcacaagctaaatcacc
ttctaccttccactgtgtttacacctaacttttgccttttccctttcagctggtgggctt
gcgacaacagccacgcgctttgctcattcctgccctttccaccaaagaactctctctttc
aaggctatttaagcacagaagaagtgacttttacttaaatgcctccttaagactgttaga
tttttttttaaaggagaaaaaaattgagaaaaaaaaagagtatttcagatgctataaact
ctcaggactgacctctggtattatgtagacttccacttaagggtcacctttctgatgcgc
tgggtgtacagagtattttttccctcctttcctttctaggattattagatagcagtggaa
gccctgcatcattaattgatttctcccatgcattgtgctatgatacaatttttcaaggct
gtgcataattgtgttctctgtgccagcgttctatgttctgtccttgtcatattgtcattg
aaggctgtttccaccctctgtaattggagatgttctacttttggacaaaggtgtgggggc
agctcaggggaacagcgctgacatttacttcatcaatttatttttattgttcctacattt
attgcagctataacagccctttaatagttatatctcctccctgtagggtattctggtatt
tgaaatttttttaactcatttgttctcatggataacagtaaagtgcatttcaggataacc
tttaggtttcaatctcctctcttcttttggctctgaggccgtcttcgctttaaactttta
ctgcatttgccagtctaaaggccagagcgccaagttcattctagcactggagtaaccaca
aattagtggtcctgaaaatttcagggaggttagtcctaaaccaagagtgcagctattaca
gtaattcaaaactggtcgtccttttaatggggagggggaactaaaggaaggtgggtggga
gggaaggggagaaagtgaggggcaatgagagagaatcctagtaaatactgagtctcatgt
tacaatcctggtcaaataaggattgtaattaaatctttatgaccaatgaagcatcagact
ggaccaattctgagtctctgcccttcaaggccaaagacacaggatacaattaagaggcaa
ctccacttggatttactattcttcttgtctttagatacgtgaccctcccccaacctccaa
gcccagtgtcacctcccttaaaaaggttaccttagtgcagccttggaaataagTCCTTAC
CTGAAAGCCTAGTGTG
Primer
(+)TTGCATGGTTTTTGTGCATC
(+)CACACTAGGCTTTCAGGTAAGGA


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