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Human element [ hs1108 ]


Position: chr9:128,945,054-128,946,417 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PBX3 - MVB12B

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGTGACCTTCCAGAGGCATCATggatatccgtggtgatgggggcagcatatggtcttcac
aggtgaggtgagagtaaccaggattggggaaaggacatatgggatacggggctgggtgag
gagtgatgtggggaccttgtaggaacaggacccctgggacctggcagttgggagcttaga
gtcattattcacggacaatcatggaaactttactttgtttcatggtctctggctggtggg
ggtcgaggacctttagattccatctaaaaaaacagagaataagggagaaagagaaacaga
gagagagcaaggacataagaacacagggtgaggctaaggaggagatgtggtgggaagaat
agagatggacgaagacaaagggagaaggaaagagggatgaggagagagagaaagagggaa
aagcagttagcagtggatacaagttggaagtgaaaggcatctggcaaccttgcattgcct
atgaaatgatattaacattttattattgtaaggtgagctttttaaaacggaattttaaat
gttaccctgctgttctggaacacaaaaacctttaattttatgcaaatgaacagtgaggag
ctgagcgcttaatgtaaacgaacactttctttgtaggagaggttggaagagagaaaaaaa
attccccaggattctttaattgctgtctgaaattatgtaaatcccagcaccaggcagaac
acaattaccccgcggccctccctgccagcgccgctaatgtctaacaaaatatcggtgggt
gacatttagacgaggtaatgcaaatgagaattaatttttttccaagacaaagggcagctg
aaagatcacctcattcatatacaggagcagagaaagcttgcgaatgctgggggtggggtg
gggtggatggggagcccagggtgccagtctccctcttggacctgggtccctcaaattctg
gcctcagggagccttaggtcactaaccctctgactgcagctcccaaacagttcttcatgg
aaattgggttaacaaatgtaaatagccattaaaaaataccccatgacccattctcagttc
catgctcatggcaggcccacagggtgctaacataaacttcttatctgaaggaggaaactg
aggcttgggggatctggtgacccagccaaaggcacacagttaactccagtggcaagaact
gcatcaattagagaaggaaggacgttggttttgtgtttctctccctcattcttccttcct
tccttccttcctttcctacctttcgtccttctttccttccttcatctttccacttatgga
aatgtttttcatttttaaaaatGTTTTTAGTGCAGAGGGCTTGA
Primer
(+)AGTGACCTTCCAGAGGCATCAT
(+)TCAAGCCCTCTGCACTAAAAAC


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