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Mouse element [ mm1106 ]


Position: chr17:84,337,625-84,339,125 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Haao - 4933433H22Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTCTTTCTCCCACTTCTCAgctttcccactctcctgctcctgcagccttgctatccagg
tgcctcctgaggggacttcggattgtctctggaccagccctactcagacctgagatctca
gtctgaatggcacttcgggaagacttctgcacctagactggggcccttttgtgttatggg
cttcctgatgtactgactgtcacctttcagacaaccacatgcctagtccctcacatttct
ccactttcttgggccacccatgaggtggaggttggatgtggcttctttgcctcggagcct
acgcagagggtctgttagaggggcagcaccactcacaactttggaaaagaagacgattgt
gtgggggaagggcaggtcaccgggtcaccaggtgccctctgggagctgtgggcagcggga
tttagccaatcccaaggttaggactctcttgccaggacagctttgctttccccggtggtt
ttcattatttttcattcccagactattttggaagctggctgctatgggaaccgagtcttt
ggaaggcccaggcctctttttcctcctacccccagcctccctccatctctattccttctt
aattggtttttagttccctggctttcaggccgtctgtttattttgattgcaactccacag
aacaaatctttaatgaaccagcttgtggggagagccattagcagccgcctgcctccaggg
agtgggggaggcgcctggcctgggtcccagcctggacttctactcagcgaggaagcggtg
gccaggtactgggtggcagctgcgcatgggtcgttccttccttcaggtgtagtctggaga
tgggaacagtttgtcctcagtaagctgtcagaagccttggctgaggtgaccttattagca
ctctgatgcacagtgacagaggttgggcttcccgggccccctgagttactgcagtaaacc
cagagggctctatgctgagtccctcattgtccagacaaggggagtgaggctggagagctg
agaagccagcagacctctgaggaagacacagataaatggagaaacctcccgagggtcgct
gcattcggggtgaattggcatccaacggtcctgagtgggctcggcaggccccagctctct
ggagtaaatgcctttgtctgtgttctgtgggcctgacaccatttatgggtttactccact
gactgggtatgatcacgtctgtccaaagagttttgccaacaggaaatgcatatgagcact
ttattgttgtgggtgtggagaacagagtgatccctgccgcttccttaccttggacaagcc
ctgtctccagtccacctcacagatctggtcacttgtctgtccctcactggcctcatgctg
ccaaagtcactcatctcaggagtacagacccggggaccagcgggactgggaacttcattc
cgttaagatcaagccccccacggccttctgccttggggctgCCTCTCTGAGAAACTCTGG
G
Primer
(+)TTTCTTTCTCCCACTTCTCA
(+)CCCAGAGTTTCTCAGAGAGG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.