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Human element [ hs1101 ]


Position: chr20:39,472,648-39,473,702 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAFB - TOP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGCCAACCCTTCTCAGGATAGccctggggaatatttggcccctgggcttcagacacttg
gcctctgaaccaaggaggccccactaagaaggccagaaagggggcactgccggcaatcac
ggcagtgagatggatgggcaacacggggcttcctgggctgggtgcagcttccaccctgtt
ctgctctgcagaggagcccggctctgctgggcacagctcaccatggcgagtatgcaaaca
accacagcacaggggccatttcagttagttcaggaaaggtacaagagcatgacaaatata
tgtaatttgtaaattggccagtcttttgcaataatttagaggctctagttaggagcaata
gaaaccccccaattactgatgtttaaggctggcactgttgctggctgaatatttcatgca
taaatgaacttccactaggccacccgctgcttctgatgaggctcttgtgggctttattgc
ccggcgcccagcagggtcccgccaatgggccccatgacggatgatgcatcgttttgcagc
ttaaataatgcagtgtggaacaggctcagtgctggtgcactttatttacatatcaattga
gtggccactctgaatatgaagaaatatgagaggggaagtggctggcactgaatatttcat
ggccatgagccccacaggaagcgaatgtccccagcccagagttaggtctggccatgtgtg
taagagagaactggcattaatagtccaggagacgaggcaagaataatcccccaagccagg
aggggagccactaactggaattgatgagccccctatcatctggacacagcctgctggtgc
tttttcaagtcagcaaaatatctgcttcctgcctgtaccttctggttcccagaaacttct
gcagagaagggagtttgttcaagccatcacacgctgactttccaagtcatgtggatggaa
cagaagttagtatgcagtggaaaacagcatagtccatcgagaaagggccccatcctttct
gagaatttgctggAAGATGAATCAGGAATCCCAGC
Primer
(+)GAGCCAACCCTTCTCAGGATAG
(+)GCTGGGATTCCTGATTCATCTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.