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Mouse element [ mm1100 ]


Position: chr2:114,678,745-114,680,238 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Atpbd4 - 4930528P14Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCAAAGACCAATCAGAATCCgatgatacaattggtgattgataagaattataatttgggt
atctgaatatacatgttttacgtataggaaaaagaaataaggactgtcagccctgtcctc
tgaaatcattagtgagaaagctgaagacagttttaaactttagagaaatgcttcacaatg
aacttacagcctagcatgctgatatgctgttgaatgtgcttaatccataagaattacatc
aacttagaattcggctcctccagaagactatttttttccctttatcagattctttgcaat
ttttcctggcagaaaggttaggaaggttcggtagttggaagaacaaagcaatcgctttta
ttgacaggtacagtagggaaggcagagaaggctaacgccattagtcacgatgcctggact
tcaaacagaattaaaactctgtttagtaaaatgcaggctcgagaaccattccgccactat
tacatcctttttttcccccttccctcagtaattattcattcagctattataactaaccac
agtaattttctaagaacaaagcaaacagggcaacaatagtttccaaaacgacgaagttta
aatgcccaaggtcagagtgtaacattttgatttccatagtatttcaaatgctacaggcct
tatgtaataattttaatgcgaaaaatatgtaggccacgcttcgctgctctttgcatatac
tgcaaagagaggggggacccttaaaaattgcttagctttaattgagcaaaaggattcacg
tgtgatctgaacttgtggctcgtaattcctctagacagctttggttgccatgtgatgatc
ctaattaaattatggaacagcactgcactacctaagcgaaagggcccattctttgctatc
acctggtaacttaactgtttgcagggttctgagtttgggacttggctgtgttctattgtg
agcttgtgtgcttttcattgttaggggtaggaaaacagttgctggtggaatcggccttga
aagttttagcctgtaggtggcagcattgtcagggtttggaagcgtgagctctgcggactt
agctgcctgcctctcttctccaagcagggctcccatctcttcaggctgggctaacatcat
tacacactcctgtcaggtaaaagtaaaatggggagaaatgtcaaagccaaaaaaattaga
cttcattcactttggtctgtgtttcattatatttctgataatagggtacatttgtaattc
tgagccgggattccgctgaaggaggtgctgagcagtcaggcgttaacccttggcaaaccc
ttcttcaacagtctgactaacttaggaaaggaaactagtctttgtggggaacgattacgt
taatcacacccagtatgaacacttgggacctttatggggttttgagattttgtagcaaaa
gcaggtcttgaggtcgccacagctttccggtatcCTGATGAAGTTTGTCCTTCC
Primer
(+)TCAAAGACCAATCAGAATCC
(+)GGAAGGACAAACTTCATCAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.