Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1099 ]


Position: chr9:128,606,519-128,608,350 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PBX3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGTTAACGCTGGCAACAAGCtccataagtgactgtttaacagaatgccaccttttttttt
tttttttaaactttaggatttaaaaacaaaaaaaatcaagaaaaagtcctaggtatatat
attttgatatatttataatggattcatcacattatcttttcaggcattaaaatatactat
ataaaatgtcaaaatattaccataatgtaagctagcattctttgagtgggtattttggtt
ctgaaaagtatgcttaaatattacaggtgtttaaattaaaaatgtcaaaccatgaaggca
taatggaagtaatcatttttacatagttttaagcagtacagggttgaaaaagctttgcat
gccagactattgtgaatgagtggagttcataagaattcaaaggacaaaagagatcattat
gctttgttacctcagctagttcattaccttaattgctgagtgtaatccagtcttggaaga
aaactctggggctttaagaagatcaacaccagcaccttatggcacagaaaatggaaaccc
tttcctgtaccattgctactccaggaacactaaaccttgatcaaaggctgaacttttctt
aaggtcggccatgtgaacatcccctggagctgtaccattcgctgaaccataatgaagttt
agtaggttcagcaccatttctctctgactgtgaccgtcctggatcactggctagcaatag
catattatcagcctttcagataggtgaggtttaaacataattatggttagtagtataata
tgcttttttaaaaatactgctttcatattatggaaactgaacaaactactgtcactattt
aactacgttagtcaggaagcattaatttttttccttccttttgaagggattgctatgtct
ccgtacctaaatctttcggaaaaccttggaaattccctaaccggtatacttttcccgaaa
agtcctttactatgcagtgtggatgcaactgtgaaatggttgactcatctgaagcatttt
tatgtatatatttttctcacctgtgcagcaatttagcttggctttgaagatagttttctt
tttaggatgcatacagttgcatacattacgctttgaaaaaattacgctaaaacaaaaaat
atgacctttaaaagcatggttgagttgcattcattttataaccatcaaagcaactctgta
ctgttgtaaggtagaaaaatcaatgatgcaatctttttccttttgcctcgtgcaatccgt
aattgaaatggaaaatcaaatgaacggctaacagataattgttttatcaatattccctgc
ctgccctacaagggtcagcatagaatgatcatgagccagggatatgatgaggacaaaatg
tgaaattgaacagcaaggaggcaataaatcagccttgacaagaaagagtgaccagcatgt
agctgttgtaggcagctttggggacagtttttgtctcaggtgtctgccctgatttaaaaa
tgtgagtttataatatttgaagctttgccaccactaagcttggctattttggggttatat
atgctactaaagaaaatctgagtagtaatctgactgtaatttatcttaaaagacaaatgt
tgaaataaataaatttccacaaattcagatattctatatggtatgattaagaaagtaaat
gtataaaaatattttattgtattgttgcatttatgcaataggccttgactctaaagtgaa
aatgattcactgaattagtttttaaaaaatatattctgtaaagtttgtaaaaaataaagt
gaatattAGTTTCTCTTGCCTAAATTATGAGA
Primer
(+)AGTTAACGCTGGCAACAAGC
(+)TCTCATAATTTAGGCAAGAGAAACT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.