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Human element [ hs1098 ]


Position: chr1:38,791,998-38,793,333 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC339442 - RRAGC

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAACCTTTTGGGGATACTGACAtctcatggagtggttgaataacatcagtctgaaagcct
attcagaattttttcttcctttaagctccctctacttgtgtgtgtatatacttgtatata
caagtacatacaggatgcatatataggatatacggtatgcatacaaacaagaagcactat
ccataggctatggacacacatgaatacacagagcacacacatccatgcacacagggactc
gcacatccccaggccatccctcccctacagatagacacatgtgcacaagtgtgcacatac
agacactaacactcccaggcccagttcaccatggctgtctccctttataaaatgagagtc
tcagttcatcattatatggtttccaatcaccaggtcttgtttcccccaccatatatctaa
aattaaatacaaagaggggaaaaacccaagccgagagtaggaagccatacgtacagattg
caatcaccacacaatgttgctggttgaaagaaatggatgttgagcattgaatgttaaaaa
ttgtgttgaattagataagaaaatcccatgtagactttgttaatgattcataatcagcta
ataagctcatcttgaggagaataatgatccgcggacctgttggctcgtttatcactgtgt
tttacaacattggcaaagaaactaattaaatccccgcatcattacagagaatccctttta
atagagatacaatgatgcactagaggctacagattacgctgcaaattgtaccaggagatt
ttggacagcgggctttaattaacatgtgagccaggagcagctcgtttaaataataaccag
cgctggaaccatctgcaagtaaagccaggcagcaggaggaggtgggactgaggccttgga
ggcaagcagggcgtaggctgtggctagggagtgttttggagtcagggctctggggagatt
ggagaaactgaggcagggctcagctccagagggcaagggagaaacaagaactgaggcatg
ttggggtcgagaatcagaccaggtgaagaaatgcagctgttgctggagaatttggaagct
ggctccacactgatggtggcagcagagccagatgagctctcggtaacccccccccatttt
ccatgtggaaagaaaaaactaagaaagaccatgcaatgaatgagcattcaccacagaccg
ctgcctggtgtggattccatctcttgcatgccagtcagctcagcactttgctaagacctg
ctggacagcaggctgggcaggtgtcttgagtgggatccagccctcttgattttaCTTGGA
GGTGAGGAATGCTTAA
Primer
(+)CAACCTTTTGGGGATACTGACA
(+)TTAAGCATTCCTCACCTCCAAG


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