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Mouse element [ mm1096 ]


Position: chr19:37,776,187-37,778,925 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cyp26a1 - Myof

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TAGGGAATCTGACTGGCTCAgtgtttgtactttgtgtatttaaaatgatttagagtgaaa
ccataggtctctcccccatgtcagaaaatatatattattatgtgtatgctgatccaaagg
tatctttgtaactttttctaaggtcattgagacttcatattttgaaattgtatggaggct
agttatattacattatttatttatttatttatttacatttttatggtgctggggattgga
tcgaaggcttcacacctctagggcaagccctttgtcattaaggcgctgcctctccctttc
agcccaacgttaattctagattctttttctttggtgcttttgggaggtaaacctgggatg
ctgcagttatttggtggtggtcgttggttttactctagagagaaggcaactttgggaagg
caacactgctgctggtgagtcgggaagcatcatcccagagcaacggggtcagcatagcta
acattttaaatcagcataatgaatccctgtcatatggaggaggcagaactcctctttgaa
gttgatattttagataagacagagccagcccctctggttatggacagttcttacccaaaa
tgaaacagagaagaaaaccactggtgtgtcacctttccttagaaggtgcttcagggatcc
ttgctgggaaaggctggtttagataagcagagcccaggctttctttattcaagatgaggc
agcaggggcagatttagcgggctgacagataaagtttttatctatctctggcaatagggt
tgagtctgacatgactgataaaatggcccagtcgtgaccctgtgaaccttggctaacctc
cgcgagagcgcggttttgtcacagttctgaccctggcatgaccacgttctgaacggaagg
ccgaactcactccagagaggttagccacggtgactggcttatgcaagcacattcccccgt
tttgaaatggcacaacctgctcgctggaacctctggacggcttgtaggttttggacttta
aaattttcattacaatttgagaatttggcaatgtcacgggaaccgggtggtctgaaatag
gtgtttgaacagctttcggtccatagttagacttgcgcaatctacctgactttagcgttt
gggtagaacatgagttgttcttgttgttggatacttctgctatttcgagagcttattgag
taacccacaatgcaatgctacaacataaagaaaggagacaagtggccaaagcttccggac
tctatactgtgaaaatggagcccttcctctgcagaatgtctgcccgagatctttgcagat
agattgagccagcctggggtggggggtggggtgggacatcaacaatcacagaaaaactta
tacaaggtcattttagggaggtttcgacactatgcactttattgaagggtgattggcttt
taacagcagtgtctttggttacaggaggactgtgaatctccatgagccgagttctgtagg
aaactcgagccattttaacatataactcaacttcttaaaagccacctgaagttttcttcc
cctctggagagctcatggttttcttctcaacctttagctcagttatatcatccaggatcc
acctcaaagatacatccccagtgcgctctctgataatgcagagggtgttgagtgaaggca
gtgaggtgcgtggtatgagactgactgaacggacataagtgagcctgggtcacacgtacc
tgggacaggtttgtttatggtaccagtacctgtgggtcagtacccatgcgatggagaaat
gaggtagccttggctaaagctgtggaaagagggccatggctgtaggaaacaagccctcgg
gactcccagagctccctatggtgatgggagcctacaatcactgtgtcggtaggtgggctc
gccacactgggctggagtccgctgcctccttcctgtggtgtttggccttgtcaattcctg
tgcctttgtcttcagtcagaggtgtggtgtcgcccaccacacagatcattatcaggacag
ggatgtgaagggaagggcttcttccacattccgaaagactgtagtcttagcaggctggag
acctagaggagacacaccaggagttttggaatcagaaaagacttcctgatgcctcttctg
cccacctccaccccttttctaacacttacctattatctttccaaggttctatagctgagg
ggtcactatctcctaaatttatctttcctgcatcctgtcacctcttctgtccctgccaca
gtacaattccttcataagcaacaggtgaattggagctatgggagattgcagagttggctc
catctttcctatcccttgtggtggtttcagggcttttgcaccttgcaaaccccaagatgt
ccacaagggggcgggcttctcccttctatgccaagcccagggtacctgtgaccgtgaaag
tttttccaccagtgaccatgaaatctaaagttgacacattccggttcaaggctgctttga
cctctagatagtgagaagctgaagacaacccaataacttagctagtactccacaaaaggc
ctgcccctcccccaagaagggatcacatactccaggtttacctagaccattacacagttc
cagaggtagtcagctgtgcactctggatttcccacattgtccatattttaatctatgcta
tgttaccccagtttTCCAAGAAAACATAGGCAGCCtaat
Primer
(+)TAGGGAATCTGACTGGCTCA
(+)caccGGCTGCCTATGTTTTCTTGGA


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