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Mouse element [ mm1089 ]


Position: chr4:154,160,848-154,162,811 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Actrt2 - Ttc34

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tcCCACATCCACTGTGTCCTTGcttagaggcttgactagcctgcagctccaggtccctgt
gtgcaatactgggcaccgaccatgtgcatgtccatcagcacaatgcaaaagctagatgct
acacttccctagcttccagacagctccatccagggtcacagcacagtggaatcccagcac
cccagagcaggggtcaagggaatgaatcccccaggaagccctatgatgcatgaccatggc
tctggagatccatcattcagactatagctccttcagacaacccgatgggaagggagagct
tcagtaacatgcacataaaggcagaatggttgggtgatgggtgccagcccctgcttggtc
ccctgagagtggtgtccaatagcccaggttaccctcacacagacagaagatagagccatc
cctttgcgtgggtgtccagtcagggtccactctcaatgcctcatccacaacagataatgg
tttaataagcgatctgttttttatttaaagggtcgacagtaaaacccagatcacatttct
cacttggtgggttaaaaaaccgcttacgctcatttctgcaatgtaaagcgacactctatc
aaatcaaacatttccagatgggcccagcttggcggaggagagccgtgtataggtggggaa
agtaggcaaggaacaccacctgctggccagtggctggcagcacctaacatctaggctagg
ctccttgctcccccagatacctgttgtattgtggatatacagtgtttgtgtgtggcttgg
gactctgccatcaacagtgcccagaagctgcagggccacgggtcctggccactctgccaa
accctctctagctgcctctgtctcctactagccactaagattacaaagcttgggtggtgt
ctacacagctttcctcccaaggacaggcatcaatagcattgggtgtggatcagaagccac
cctaaacacagcatgtatttatcacctggagggcaagaggggcgctttggaaggtagctg
tcgggacaagggcttagagtgagcccctcccacacagcatcctgacccagacttccacac
catagcaaggatactaagttgtcccatgaacaggtcctcaaattgtcctcacctcccggg
atataagaacatccctctctagagtctccaaaaatctcaggagctagtgaatggctccat
tcaacctagaggacactagcaatgtcaggccagccaccagattctagtttgtaacccctg
gctactgaggggtgacagacacctggtgtgagatacctggctgctgcactttgagcatgg
tgtccaggcattatggagtctcctgggcccactgcccatctctgggggcaggagtcctag
aaaccggcctgttggcagtctccccaaaaatgcattctcgggattcccccacggtatgca
gttttcactctgaattaaagccgaagccagctctaaatttaataacagagttataaactc
tccgaagtgtacggatggctgatcgaccccggagaggagtggaatctataaatagaggtc
cttgtgagcaaacctcagggcttgctccaaagcttgctgaattacctttttgtaaaagct
gccacacggctgtgctggtaagagcagaaccagggatgccaccacccccctgaggtaccc
ccacaaggtctgctcctcctaaagtgagcccctccccagagcacagacacccacagaggc
ccagtgtctacgccagtgtctgcactctgacaacaagcaagaggacagaagccaaagagg
ctgagaacagacaggagccagctggccagagaagggccatcctggctccagagttcaaga
tgatcactcctacaggaaccactcctgtcagccgtggggctgacctgggggtgccagcag
ggacggtctgtcagagctcacgaaACTAGCCACCCCAACTTCCT
Primer
(+)caCCACATCCACTGTGTCCTTG
(+)AGGAAGTTGGGGTGGCTAGT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.