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Mouse element [ mm1083 ]


Position: chr9:18,463,399-18,467,097 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mbd3l1 - Olfr24

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAtgTGGTTGCAGGGTTGATGTTAgtagaattaaccatggattctgaaagtgtaaatgtc
tgtgttccactgtgttgggtctctgtgtttgaagaagtggttgatagatctttggaagtt
accatgtttgatgtcaccacagtatgttctctgtggctggttgcagtctgttctgattct
gtggtggttgtagatcttgagtacttggtggagattccagtggaagtgtcctctgatatt
gaatggtgtaacttggaaaggaatgtactgccagcagatatatcttttgccacagatgtg
acaagagaaagagttgtgggtacattagtctggctaattctgtgttcttttgttgaatgt
atgtcttcatatttactggaacttttccatgctttcatcaaggaggaatctgtcggtttt
ccaatctctgctgttgtaaaggaaattgactgtggagatgaaagtgtggtgtcttctgat
ctggcaagaattgttgtgaaatattcatgttcagatgagattggtgtagggataatggtg
tgtttgagtttgggtgttgagcttccatttttcttgtttccttttgtgactgaggaaaca
gaggtcatctgtgagattttggacacttgtgcaatgttaaaacttttctgaggactgcca
ttcaagctttggattgaggaaatcacaggttctgatcttgtggacaaatccgttgggatt
gtgtccttagaaactgtgatgacataggccactgaaccagtaaatgatgtactgtgtgtg
tctcttatggaagaaatagcagaaggtgaatgtgactcatgtggcattgtggaatcttca
aacacagattcttcccaaagattatgtgtctgtggtcctgaagtaatatttttgggagga
tccatggcttctggatgtggaaatgtttggaccctactggagttagtgacattgattgag
gcagaggttgatgggcttttagaagtcaccatgcttgatgtcaccacagaatgtccattg
tggctatttgacaactgttgtaatttcgaagtgatgctggaactaggagtcccaatggtg
attccaaaagaagtatcttctgatattgattcatgtagtgttgtaaaagatatgttccca
gtagacatgtcttttgttgaaggttcaagaagagaaagattcatgggcacttcagtatgg
ttgagactatactctgtgattaaatccacttcttcaagtgtgctagattgtatctgagct
gtggtccaactttgtttggtagtgtgatgggtaataggtagatgtctttgtgatgataac
ttaacaggtgatgatgaacttgttcttactgtagttttccaggaactttcagagctgatt
ccttccagtggtgatgaatttgttctggaggggactttgtcacttttgagaagagtggat
gtctctaacaatgaataattatgagagacactggagtgcattcctgcccctgaggtagtt
gctggtataccttgagatgcaataatgtttggggttaccacaaaatgttctatctgacta
gtggtaatttctttgctgattatggagtttgggggcccagtgggcattccagtggagatt
tcttctgctttgattacctggttagtgattggataggaaatgctgttatttgtagattct
gttctggatacaagaacagaattagtaaagggcacttcggtaaaattaggagtatgttct
gtggttgaaataatctcagttatgttagtttctgccacagttacagtggtagatgtgtct
gatagaagagtactatttaatgcagttccattatgtgtctcagtcctggtaaaattagat
gtagtcattgaaggataaccagtgctcttccctgttgtttcagggatctttgtggacaat
gtggttttaagtaaaactgacccaaatgttacatcaggagtagaactggtagaatttatg
atgttcactgctttctttgagtttctcgtgcctttcatagcagccagctttgaaggaatg
ttacttctccaatgtaaagttgaagcagtcactgttgtgcttgtgtccaactttcttgtg
tttgtcttgggtattggtctgagcactgaagtcataggtccactagagctatgtggctct
tggaacgctgaggctacatgagaaggcaaggtgggttttgtttatttgacatagtaagct
cttgaaaaataataaataattgccaaacagataatcaaacaatgcattcagaaatagcct
tatatactttcttatagctataagctgattagaatcatattatgcttgatatctgcatga
atcatatatttttttaatattcatctagcagaagaaattttatcccagactatattcatg
ctgtttcaggataaaacatttctcactgagtattcctatgtttacataaacataaattaa
aataatcatttcaaaattgtattatttctcaggtgaaactgcatgaaatatagcttataa
gtaaacttacagcccaataattataaaaataagtcaggttagcttaaaatgcagggaata
aatgaccatggattgttcagccctaaattatactgtttccttaatactcaaggagcctcc
tagaagaggaaatggaaaaaccataagaaccagagctacaaaacaatgtattctgaatgt
gacaggaccattactctcatgaaatcatggctactgtgttggactgtacaagacctacac
aagaccaagtctatcaacattccagtataggtaggtaggggagctagagttactgtcaat
tgattgtagattggtaagagacagttctctccagagttgtggctcatggaatattgtcta
tgccccataaatgtttggtgctacagatgcatgcatagagcctgcattaattagactcaa
tgggttattcaaaatagaagaagagaataaatataaaaaggaggaggaggaagaggagga
tgatgagggcaaggaggagaagaaggaggaggaagaggagaaggaggaggaagagaaggg
ggaggaagaggaggaggaggacgagaaaaaagagaggagctggacagatggtccaaacgg
taaaactatgtgctgccaagtcaaacaaactgagtttgattcctggtatgcacatagtgg
gaggaaagaactgacttctgaaaaatttcctctgatctccacatgtacacgtggacatgc
atacacacacacatacacacacacaccccacatgcacacacatacactaaactaactaac
taactaactaactaactaactaactaactaaacatgcactacaaaatattttttgcagag
aaaaaggatatgaagttgggaagggaacacgatggaaaagtctgggaggagttggagaca
ggaatgaagggaatatgataaaaatttgtcatttacatgtatgaaattctcaagtagtaa
atatatttttaaaaatagccagtttcaagaagttaacagtttgtcacaggctgaacatac
aatagaataaattgtataaataaaataaattatataaatagaataaattggtttcttggt
atgtagatgtctgaaatttttattagactttgctaggaggtgtatttatatagttaattt
tctcgaaaagaaaaagaaaGCAAACCTATTGTTGGGGAA
Primer
(+)caccTGGTTGCAGGGTTGATGTTA
(+)TTCCCCAACAATAGGTTTGC


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