Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1078 ]


Position: chr9:82,224,085-82,226,757 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TLE4(intragenic)

Timepoints:
e11.5

Expression Pattern
cranial nerve (7 out of 8 embryos) 
forebrain (7 out of 8 embryos) 
hindbrain (rhombencephalon) (7 out of 8 embryos) 
midbrain (mesencephalon) (7 out of 8 embryos) 
neural tube (7 out of 8 embryos) 

Embryo 1



 
Sections available
Sections available
Embryo 2



Embryo 3



Embryo 4



Embryo 5



Fasta sequence
GTTTTGGAGTATGAAGAAATAAAGGAtaaaagattcttttctgtgttttcctgtttcgtt
actacctggtcatgctcctaggccactgtccatcagtactgtagagttagcctgttgaca
gtcacatgtcatgtgttgagtgcgtagccaagggattttcgtagaatgccttttttgtct
ttacatttttctgagatattttatccaaaccaaggttttctttagcagggatggtgatca
tttttattttatttatttttttgttggagaatggtgtaaaggtgggtaattttgagagag
aggaaatagaatggtagtgagttgagggtaggaaaatacatctgcaacttttattgtttt
ttaaatgagcatcttgatagggaagatagaatggaattgtcaaaaattgttaatgtgttt
gacaaagtgtggctgtcagtatgatctttttgttacattttgacatgaacaattgtcctt
ttattggggctgttaatgctattttagaatatcatgagcatctgaaggcaatagtttagc
agtgtccataaagcatcaaataccattataatatctagtaaccctaacagcaatatttca
gaatccctgcctgtttaaatgggctatctgtgaatgtacttgctcagggatgcatgaccc
acatcacctataaatttgattggaagctaacagtactggcgtagcctgatggatagcaga
ttagagccctgattaaccatgtgattcaaagactgggaatatattgtctaagcaagattc
atcagatgcaatcagaatttcaagtggtcagatgaaattcaaatgtgtgttgtggctttt
cctcccctattgcttttcctcctaggttgcctttttttccttctttccccaaagctgaaa
aatacttctttgatgaatctgctccttaccctaaagctgtctgtctgttattcatcagaa
agcaggtcgcagttcagtgagcagaagaaaagattttaatagaagctgtgccaagggctg
taatgcatcattttagggccctaattacattacaatgacaaatatcaatggtgacaacag
caataacctacatcctttaatggctgtgctggaaaaggagtttgggccccacgccattat
attagactcagtttcaaaacataggccattagaagtgtgtgtccacagtgttattggctg
atcgctaaagcccagtggaaaggcctgtaaataaatgatgcctccctaaagctgggtcct
gtgggacaaaagaggcgaaattagatgaccatgggagcagcagtgtttccgaggcaactt
tagatttcaaagtgaagaatgacctgcttaattttatgaaatcacacacacaccccaccc
ccccactgccaattagcctgaccatgaaaatccattggcatgacaacttaaagaaattaa
gaagtcttttaaacaaaaggagatctttaacggaagtttggaaggtttctgccctcccgt
ttctgttgtgtgtgtgttaacctatgtgattgaataaaaaggctcttctcctttttacat
ttatttttaagaaaatgtagaatttttttaaaaaatagttgctcagacttaatacagcct
aggtccaaaattttatttcaccagatgaataagtttccttagagtcgtttttattgccta
gattatgtaggcgaactaaagaactcagttttcttatgtgcccacacatttttcagccct
cctagcaagggactattttatttatgtaaacaacataatgacgaaaatatgcttggcaga
tggttctaagcattagaatcatcagtttggtctgccccaaagtgtctcattatcttttat
tctctccccctccacctctccctgcaaaaagcttaacaaccaaatgcatttgagatgctg
tactttcagcctggtgaatgctactctatttttattgctcaccctggaatttcaccccat
aaccactgtggtatgttcgtccaggtggagagtggtttggtgattcccattgcagctctt
catggtggcttaagcattcttaaaggatggctaaatgctccatggggccagtgcagtaaa
ttaaatcaggtcagcacagttgggtccttattcactgcagcttattggtgctgggttttt
gtccatactgttaggaatgcaggctggaatggaaagcttggatttgaaacttcatggtga
atttgtgttttcttttggctggtaaagtttttaaggtgctggcatttaaaagattgcata
gctacacagttagaagggttgctgatgaaagaaggaagcctagattgcacaagtagagtg
tcactgtcattctggtaatgacttggcaagaaaaggcattttgggcctcacataaaatga
ggaactgaccctggatggaatttaagaatgtcttagggatagtaattgctttacattttc
tgcctttcaattcttcttagctctctttcctccattccatcattaaaatataaactattt
tgtatgtacgtgtattaaaaaaaactgtgtatttatacatcacaaaatatacaaggcacc
atctgaaaaatacaaattaagataaacattggtaaaactgtgagtaactttttaaagaaa
acatgtagTGGTGGTTTTTCTTTTAACTTACTG
Primer
(+)GTTTTGGAGTATGAAGAAATAAAGGA
(+)CAGTAAGTTAAAAGAAAAACCACCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.